Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES3252 Chr00 483008927 7e-97
CaES3253 0.0 192 Chr00 322620290 1e-144
CaES3278 Chr00 435712571 8e-57
CaES3283 Chr00 712804115 2e-58
CaES3288 Chr00 355964564 1e-134
CaES3291 Chr00 136739022 2e-53
CaES3294 Chr00 384722141 3e-57
CaES3297 Chr00 629779898 1e-118
CaES3305 Chr00 320422883 1e-128
CaES3313 Chr00 252840976 5e-56
CaES3326 Chr00 659003421 4e-40
CaES3350 Chr00 426315926 1e-111
CaES3360 Chr00 487235209 4e-98
CaES3363 Chr00 563205474 1e-147
CaES3372 Chr00 526846652 1e-136
CaES3389 Chr00 419297635 1e-152
CaES3394 Chr00 502118922 1e-103
CaES3405 Chr00 671021173 2e-92
CaES3415 Chr00 478872082 1e-139
CaES3427 Chr00 581935007 1e-148
CaES3429 Chr00 117039886 2e-62
CaES3435 Chr00 192691432 1e-121
CaES3441 Chr00 283019224 1e-36
CaES3445 Chr00 216319738 1e-143
CaES3462 Chr00 314863809 1e-100
CaES3469 Chr00 306723704 1e-145
CaES3471 Chr00 263160868 2e-86
CaES3495 Chr00 713613415 1e-97
CaES3505 Chr00 447121275 1e-104
CaES3509 Chr00 574602099 8e-43
CaES3510 Chr00 461679592 1e-101
CaES3519 Chr00 642930843 1e-52
CaES3542 Chr00 199899097 1e-78
CaES3562 Chr00 250471012 1e-104
CaES3563 Chr00 669118663 1e-148
CaES3564 Chr00 544971521 1e-148
CaES3567 Chr00 618355231 1e-122
CaES3571 Chr00 212196649 1e-125
CaES3587 Chr00 231188463 8e-65
CaES3588 Chr00 501906410 5e-71
CaES3589 Chr00 370563608 1e-151
CaES3596 Chr00 418441877 1e-143
CaES3610 Chr00 712452318 1e-126
CaES3628 Chr00 233496916 4e-91
CaES3642 Chr00 450686715 1e-141
CaES3661 Chr00 362744081 1e-111
CaES3676 Chr00 452241399 1e-129
CaES3696 Chr00 303152018 1e-127
CaES3704 Chr00 503506249 1e-118
CaES3707 Chr00 669216170 1e-138
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum