Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2814 Chr00 228074586 1e-146
CaES2816 Chr00 491917553 1e-107
CaES2824 Chr00 352824095 1e-158
CaES2828 Chr00 433750978 1e-140
CaES2831 Chr00 544244733 4e-86
CaES2834 Chr00 159984144 2e-69
CaES2838 Chr00 618257047 1e-118
CaES2844 Chr00 306723097 1e-129
CaES2847 Chr00 533826483 1e-114
CaES2853 Chr00 686184299 1e-155
CaES2859 Chr00 180975936 1e-140
CaES2865 0.707 169 Chr00 665947424 1e-151
CaES2877 Chr00 502182560 1e-100
CaES2885 Chr00 558458790 1e-149
CaES2897 Chr00 478871435 1e-75
CaES2902 Chr00 522421567 1e-113
CaES2905 Chr00 558076605 1e-36
CaES2906 Chr00 415486393 1e-104
CaES2912 Chr00 452136607 1e-150
CaES2913 Chr00 592380632 1e-148
CaES2924 Chr00 563825658 1e-143
CaES2942 Chr00 618314898 2e-95
CaES2944 Chr00 589185776 1e-123
CaES2951 Chr00 247824211 3e-57
CaES2953 Chr00 655665722 1e-103
CaES2957 Chr00 580478616 5e-80
CaES2960 Chr00 392687043 1e-147
CaES2977 Chr00 245678550 1e-138
CaES2986 Chr00 710500502 1e-113
CaES2989 Chr00 456396243 2e-72
CaES2999 Chr00 611863790 1e-45
CaES3012 Chr00 224972680 1e-112
CaES3028 Chr00 668398406 1e-101
CaES3029 Chr00 503507839 1e-141
CaES3069 Chr00 320260953 1e-130
CaES3082 Chr00 426315535 1e-128
CaES3087 Chr00 475980680 1e-137
CaES3094 Chr00 227674582 2e-46
CaES3139 Chr00 593084595 1e-135
CaES3156 Chr00 579577396 1e-146
CaES3159 Chr00 303070507 1e-82
CaES3161 Chr00 526801523 8e-97
CaES3163 Chr00 698828272 1e-142
CaES3168 Chr00 527248279 2e-94
CaES3172 Chr00 352832499 3e-48
CaES3197 Chr00 226558710 1e-116
CaES3202 Chr00 434459449 1e-57
CaES3223 Chr00 618293465 8e-50
CaES3227 Chr00 360830100 1e-104
CaES3236 Chr00 669175867 2e-85
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum