Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2411 Chr00 475979434 6e-87
CaES2418 Chr00 619008997 1e-116
CaES2422 Chr00 250473124 1e-115
CaES2427 Chr00 539115268 1e-106
CaES2430 Chr00 315227956 3e-72
CaES2449 Chr00 658318147 2e-91
CaES2467 Chr00 315988043 1e-96
CaES2476 Chr00 665733102 1e-40
CaES2478 Chr00 427776494 6e-26
CaES2496 Chr00 436808427 2e-84
CaES2498 Chr00 538650859 4e-95
CaES2509 Chr00 667977550 7e-78
CaES2515 Chr00 330036085 2e-76
CaES2516 Chr00 672843158 4e-84
CaES2521 Chr00 409064633 5e-39
CaES2533 Chr00 667302044 1e-104
CaES2538 Chr00 385553142 1e-99
CaES2550 Chr00 174827899 1e-133
CaES2568 0.0 192 Chr00 202051688 1e-73
CaES2582 Chr00 490552018 1e-138
CaES2600 Chr00 319302897 1e-134
CaES2617 Chr00 584134271 1e-114
CaES2632 Chr00 334294739 1e-136
CaES2645 Chr00 596160985 2e-73
CaES2649 Chr00 628559993 1e-129
CaES2653 Chr00 513924576 9e-53
CaES2657 Chr00 666348652 1e-89
CaES2661 Chr00 417561317 1e-35
CaES2665 Chr00 459606493 1e-82
CaES2666 0.381 191 Chr00 270708995 1e-135
CaES2681 Chr00 452136878 2e-86
CaES2696 Chr00 456824827 1e-86
CaES2702 Chr00 670377924 6e-88
CaES2709 Chr00 355964381 1e-129
CaES2710 Chr00 181108437 1e-109
CaES2724 Chr00 156477149 1e-67
CaES2725 Chr00 371856749 1e-138
CaES2726 Chr00 666840789 1e-133
CaES2744 Chr00 421009400 7e-94
CaES2747 Chr00 536807189 1e-113
CaES2754 Chr00 666569033 2e-72
CaES2764 Chr00 628797019 7e-96
CaES2768 Chr00 611811522 5e-21
CaES2773 Chr00 509879054 1e-103
CaES2779 Chr00 386934712 1e-129
CaES2783 Chr00 527183808 2e-72
CaES2785 Chr00 623041712 1e-113
CaES2787 Chr00 480776093 1e-92
CaES2792 Chr00 490585901 1e-144
CaES2806 Chr00 665720338 1e-136
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum