Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES0740 Chr00 407840392 3e-87
CaES4732 Chr00 408711927 1e-146
CaES4553 Chr00 408942892 1e-110
CaES2521 Chr00 409064633 5e-39
CaES5179 Chr00 413231386 1e-120
CaES1311 Chr00 414305263 2e-75
CaES2906 Chr00 415486393 1e-104
CaES2329 Chr00 415945244 1e-122
CaES2661 Chr00 417561317 1e-35
CaES3596 Chr00 418441877 1e-143
CaES3389 Chr00 419297635 1e-152
CaES0408 Chr00 420041665 1e-143
CaES2744 Chr00 421009400 7e-94
CaES2333 Chr00 421539650 1e-161
CaES1782 Chr00 421542643 5e-47
CaES2313 Chr00 422230304 1e-106
CaES0464 Chr00 422317407 1e-119
CaES3082 Chr00 426315535 1e-128
CaES3350 Chr00 426315926 1e-111
CaES1602 Chr00 426343310 1e-143
CaES5388 Chr00 426404622 5e-39
CaES4491 Chr00 427028655 2e-92
CaES2478 Chr00 427776494 6e-26
CaES1167 Chr00 428325388 1e-129
CaES5014 Chr00 428412953 1e-114
CaES5703 Chr00 428869273 2e-86
CaES0990 Chr00 432839753 1e-106
CaES2828 Chr00 433750978 1e-140
CaES3202 Chr00 434459449 1e-57
CaES5162 Chr00 434459449 9e-56
CaES4240 Chr00 435362211 7e-76
CaES0880 Chr00 435364031 1e-139
CaES5660 Chr00 435373299 1e-32
CaES4802 Chr00 435398155 1e-120
CaES1528 Chr00 435417804 4e-84
CaES0490 Chr00 435712430 3e-43
CaES3278 Chr00 435712571 8e-57
CaES3770 Chr00 435719410 1e-146
CaES2099 Chr00 435727136 8e-94
CaES2496 Chr00 436808427 2e-84
CaES5399 Chr00 436810151 4e-97
CaES1598 Chr00 436959960 8e-83
CaES0489 Chr00 440680500 1e-80
CaES0557 Chr00 442943762 1e-114
CaES4775 Chr00 443950669 1e-121
CaES5373 Chr00 444514767 8e-54
CaES3505 Chr00 447121275 1e-104
CaES0644 Chr00 447121305 4e-94
CaES1923 Chr00 449233250 1e-139
CaES5551 Chr00 450669576 1e-73
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum