Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES1862 Chr00 314406388 1e-140
CaES5260 Chr00 314411632 6e-26
CaES3462 Chr00 314863809 1e-100
CaES2430 Chr00 315227956 3e-72
CaES2467 Chr00 315988043 1e-96
CaES5341 Chr00 317602877 2e-52
CaES2283 Chr00 318048176 1e-129
CaES2600 Chr00 319302897 1e-134
CaES3069 Chr00 320260953 1e-130
CaES3305 Chr00 320422883 1e-128
CaES0505 Chr00 320424208 5e-62
CaES4405 Chr00 320898788 8e-83
CaES2515 Chr00 330036085 2e-76
CaES2632 Chr00 334294739 1e-136
CaES4131 Chr00 340183557 1e-150
CaES0853 Chr00 340860959 1e-137
CaES1952 Chr00 350115321 1e-91
CaES2824 Chr00 352824095 1e-158
CaES3172 Chr00 352832499 3e-48
CaES2709 Chr00 355964381 1e-129
CaES3288 Chr00 355964564 1e-134
CaES0552 Chr00 360651209 3e-80
CaES5728 Chr00 360653987 6e-45
CaES3227 Chr00 360830100 1e-104
CaES3661 Chr00 362744081 1e-111
CaES4923 Chr00 366159807 1e-102
CaES0882 Chr00 367382787 1e-149
CaES4419 Chr00 368697550 1e-118
CaES3589 Chr00 370563608 1e-151
CaES2725 Chr00 371856749 1e-138
CaES4668 Chr00 373902108 1e-135
CaES0322 Chr00 374742142 4e-83
CaES1819 Chr00 377535971 5e-53
CaES3294 Chr00 384722141 3e-57
CaES0572 Chr00 385167028 1e-124
CaES2538 Chr00 385553142 1e-99
CaES2779 Chr00 386934712 1e-129
CaES2050 Chr00 392164857 1e-74
CaES2960 Chr00 392687043 1e-147
CaES1535 Chr00 392932878 4e-97
CaES5719 Chr00 395250586 1e-111
CaES5249 Chr00 399577831 5e-44
CaES0843 Chr00 399577832 1e-30
CaES1788 Chr00 399578106 2e-52
CaES1130 Chr00 400437593 1e-112
CaES4139 Chr00 401451791 4e-48
CaES4887 Chr00 402360478 1e-137
CaES4598 Chr00 402375399 1e-113
CaES2032 Chr00 402743161 1e-130
CaES4969 Chr00 406187513 1e-122
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604


MarkerDB | Capsicum annuum