Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES1418 Chr00 303075834 1e-125
CaES1423 Chr00 470916259 8e-68
CaES1448 Chr00 685551817 1e-120
CaES1453 Chr00 655614358 1e-135
CaES1456 Chr00 478856673 1e-96
CaES1459 Chr00 174561333 1e-123
CaES1468 Chr00 545210902 5e-34
CaES1482 Chr00 174178031 3e-50
CaES1499 Chr00 199585226 1e-89
CaES1500 Chr00 582496942 9e-78
CaES1510 Chr00 580313121 2e-73
CaES1522 Chr00 498594947 3e-87
CaES1528 Chr00 435417804 4e-84
CaES1535 Chr00 392932878 4e-97
CaES1557 Chr00 551290606 4e-38
CaES1573 Chr00 672071083 3e-67
CaES1584 Chr00 473245585 2e-84
CaES1585 Chr00 307833775 1e-49
CaES1598 Chr00 436959960 8e-83
CaES1602 Chr00 426343310 1e-143
CaES1617 Chr00 478786222 1e-107
CaES1618 Chr00 480939406 1e-39
CaES1681 Chr00 545173643 1e-59
CaES1711 0.474 140 Chr00 473250697 1e-112
CaES1716 Chr00 505872476 1e-121
CaES1718 Chr00 275520632 1e-87
CaES1726 Chr00 646549647 5e-58
CaES1741 Chr00 192845775 1e-65
CaES1752 Chr00 580110176 1e-131
CaES1760 Chr00 470395652 1e-80
CaES1761 Chr00 259213184 2e-38
CaES1772 Chr00 250470642 1e-33
CaES1782 Chr00 421542643 5e-47
CaES1783 Chr00 478363743 2e-82
CaES1788 Chr00 399578106 2e-52
CaES1792 Chr00 522965527 7e-32
CaES1805 Chr00 525567594 1e-105
CaES1806 Chr00 491917314 1e-145
CaES1817 Chr00 618880522 2e-45
CaES1819 Chr00 377535971 5e-53
CaES1835 Chr00 538763069 1e-115
CaES1837 Chr00 485995557 1e-136
CaES1845 Chr00 575484232 1e-105
CaES1862 Chr00 314406388 1e-140
CaES1871 Chr00 670311742 1e-105
CaES1914 Chr00 293783313 1e-156
CaES1919 Chr00 667240852 1e-104
CaES1923 Chr00 449233250 1e-139
CaES1926 Chr00 524838172 1e-113
CaES1928 Chr00 667230896 1e-132
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604


MarkerDB | Capsicum annuum