Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES1772 Chr00 250470642 1e-33
CaES3562 Chr00 250471012 1e-104
CaES0256 Chr00 250472594 1e-120
CaES2422 Chr00 250473124 1e-115
CaES5117 Chr00 250473147 1e-131
CaES3313 Chr00 252840976 5e-56
CaES4081 Chr00 258035703 1e-135
CaES4414 Chr00 258225733 1e-114
CaES1761 Chr00 259213184 2e-38
CaES3471 Chr00 263160868 2e-86
CaES5323 Chr00 266108840 7e-86
CaES0305 Chr00 268674295 1e-132
CaES4368 Chr00 269699504 4e-97
CaES1718 Chr00 275520632 1e-87
CaES4392 Chr00 275999590 1e-142
CaES4648 Chr00 281430539 9e-30
CaES0182 Chr00 281503643 1e-111
CaES1233 Chr00 282120094 1e-124
CaES3441 Chr00 283019224 1e-36
CaES0228 Chr00 283633512 1e-107
CaES4864 Chr00 283809446 1e-124
CaES4341 Chr00 288381654 3e-71
CaES1134 Chr00 292004801 1e-116
CaES4484 Chr00 292370729 8e-94
CaES0621 Chr00 292376673 1e-132
CaES1914 Chr00 293783313 1e-156
CaES0345 Chr00 293946991 1e-108
CaES4208 Chr00 295518598 1e-133
CaES4731 Chr00 295759590 2e-79
CaES1049 Chr00 295877389 1e-125
CaES3825 Chr00 300362105 4e-76
CaES3976 Chr00 300650833 7e-62
CaES3159 Chr00 303070507 1e-82
CaES0881 Chr00 303074370 5e-95
CaES1418 Chr00 303075834 1e-125
CaES5168 Chr00 303076450 1e-150
CaES3696 Chr00 303152018 1e-127
CaES4103 Chr00 303357541 1e-115
CaES0939 Chr00 305323627 1e-102
CaES2844 Chr00 306723097 1e-129
CaES3469 Chr00 306723704 1e-145
CaES1585 Chr00 307833775 1e-49
CaES0324 Chr00 308448158 6e-66
CaES5070 Chr00 308795571 5e-89
CaES0514 Chr00 309337574 7e-55
CaES4417 Chr00 309346006 1e-101
CaES1975 Chr00 310247223 5e-39
CaES5496 Chr00 311670855 2e-64
CaES4596 Chr00 311707978 1e-112
CaES5269 Chr00 313947189 2e-69
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum