Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES0961 Chr00 247823837 1e-110
CaES0979 Chr00 478911729 6e-82
CaES0983 Chr00 536161253 1e-145
CaES0989 Chr00 572785773 1e-99
CaES0990 Chr00 432839753 1e-106
CaES1026 Chr00 671298675 1e-123
CaES1031 Chr00 456379296 1e-102
CaES1048 Chr00 525150290 2e-60
CaES1049 Chr00 295877389 1e-125
CaES1053 Chr00 586637738 2e-91
CaES1057 Chr00 666279915 1e-106
CaES1074 Chr00 600712273 1e-133
CaES1085 Chr00 658992430 1e-87
CaES1109 Chr00 667141785 1e-152
CaES1118 Chr00 654964458 1e-128
CaES1125 Chr00 503303274 8e-88
CaES1130 Chr00 400437593 1e-112
CaES1132 Chr00 513033594 1e-89
CaES1134 Chr00 292004801 1e-116
CaES1146 Chr00 672964351 4e-84
CaES1149 Chr00 579588122 7e-76
CaES1156 Chr00 686185742 1e-144
CaES1167 Chr00 428325388 1e-129
CaES1187 Chr00 661440829 1e-121
CaES1188 Chr00 186549387 7e-91
CaES1229 Chr00 462407228 2e-93
CaES1233 Chr00 282120094 1e-124
CaES1242 Chr00 655455556 1e-115
CaES1250 Chr00 582496761 1e-119
CaES1251 Chr00 544950962 6e-84
CaES1253 Chr00 604437941 5e-97
CaES1283 Chr00 706907031 1e-94
CaES1289 Chr00 475963696 2e-79
CaES1302 Chr00 473237353 1e-132
CaES1304 Chr00 539000789 2e-82
CaES1311 Chr00 414305263 2e-75
CaES1315 Chr00 171902991 1e-102
CaES1320 Chr00 665397791 1e-111
CaES1322 Chr00 471670578 3e-59
CaES1327 Chr00 670053785 1e-150
CaES1333 Chr00 165342955 3e-66
CaES1351 Chr00 522616044 1e-132
CaES1352 Chr00 705832408 1e-132
CaES1377 Chr00 175015221 1e-85
CaES1381 Chr00 618280115 9e-94
CaES1383 Chr00 544941793 8e-82
CaES1391 Chr00 206185384 1e-124
CaES1396 Chr00 580128613 1e-121
CaES1398 Chr00 618282715 1e-128
CaES1402 Chr00 621257992 1e-123
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604


MarkerDB | Capsicum annuum