Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES2710 Chr00 181108437 1e-109
CaES4935 Chr00 183024030 5e-82
CaES4985 Chr00 184872364 1e-119
CaES5442 Chr00 185479697 6e-59
CaES2372 Chr00 185479745 1e-152
CaES0772 Chr00 185528535 1e-134
CaES0147 Chr00 185927804 7e-87
CaES5404 Chr00 186110298 3e-32
CaES1188 Chr00 186549387 7e-91
CaES0074 Chr00 187902330 1e-53
CaES0061 Chr00 188728898 3e-96
CaES4641 Chr00 188969974 1e-128
CaES2216 Chr00 190426871 1e-133
CaES3435 Chr00 192691432 1e-121
CaES1741 Chr00 192845775 1e-65
CaES4439 Chr00 194516818 1e-154
CaES5360 Chr00 197215244 8e-68
CaES0274 Chr00 197216092 4e-95
CaES5449 Chr00 197623264 3e-65
CaES4272 Chr00 198602325 4e-50
CaES1499 Chr00 199585226 1e-89
CaES0773 Chr00 199736932 1e-101
CaES3542 Chr00 199899097 1e-78
CaES4071 Chr00 199939627 1e-121
CaES3832 Chr00 205314720 8e-49
CaES1391 Chr00 206185384 1e-124
CaES0199 Chr00 211652547 1e-110
CaES3571 Chr00 212196649 1e-125
CaES5140 Chr00 213741650 4e-97
CaES3445 Chr00 216319738 1e-143
CaES4031 Chr00 221306937 5e-69
CaES3012 Chr00 224972680 1e-112
CaES0258 Chr00 226497315 1e-39
CaES3197 Chr00 226558710 1e-116
CaES2322 Chr00 227456004 1e-114
CaES3094 Chr00 227674582 2e-46
CaES2814 Chr00 228074586 1e-146
CaES3587 Chr00 231188463 8e-65
CaES3628 Chr00 233496916 4e-91
CaES4949 Chr00 238646438 5e-93
CaES3725 Chr00 240848858 1e-115
CaES4242 Chr00 245677251 7e-85
CaES2977 Chr00 245678550 1e-138
CaES2205 Chr00 245678566 7e-88
CaES4215 Chr00 245723965 1e-111
CaES4175 Chr00 245917694 1e-49
CaES5526 Chr00 247301564 3e-85
CaES0961 Chr00 247823837 1e-110
CaES2951 Chr00 247824211 3e-57
CaES0904 Chr00 247824211 9e-75
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum