Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)
Evalue
Name Position*
CaES2657 Chr00 666348652 1e-89
CaES2754 Chr00 666569033 2e-72
CaES0928 Chr00 666618567 1e-87
CaES2196 Chr00 666816612 8e-32
CaES2726 Chr00 666840789 1e-133
CaES1109 Chr00 667141785 1e-152
CaES2219 Chr00 667198527 1e-124
CaES1928 Chr00 667230896 1e-132
CaES1919 Chr00 667240852 1e-104
CaES2533 Chr00 667302044 1e-104
CaES2509 Chr00 667977550 7e-78
CaES3028 Chr00 668398406 1e-101
CaES0273 Chr00 669118178 1e-119
CaES3563 Chr00 669118663 1e-148
CaES3236 Chr00 669175867 2e-85
CaES3707 Chr00 669216170 1e-138
CaES4304 Chr00 669217777 1e-103
CaES4620 Chr00 669476975 1e-141
CaES0106 Chr00 669639843 1e-131
CaES5461 Chr00 669655990 3e-91
CaES3851 Chr00 669656117 3e-97
CaES0805 Chr00 669731918 1e-101
CaES1327 Chr00 670053785 1e-150
CaES1871 Chr00 670311742 1e-105
CaES2702 Chr00 670377924 6e-88
CaES3405 Chr00 671021173 2e-92
CaES1026 Chr00 671298675 1e-123
CaES1573 Chr00 672071083 3e-67
CaES3723 Chr00 672717478 1e-121
CaES2516 Chr00 672843158 4e-84
CaES1146 Chr00 672964351 4e-84
CaES0793 Chr00 684087073 1e-80
CaES0721 Chr00 684171941 1e-107
CaES0229 Chr00 684285111 1e-117
CaES1448 Chr00 685551817 1e-120
CaES0512 Chr00 685608746 1e-48
CaES0925 Chr00 685745112 9e-99
CaES2853 Chr00 686184299 1e-155
CaES1156 Chr00 686185742 1e-144
CaES4104 Chr00 695694561 1e-127
CaES3163 Chr00 698828272 1e-142
CaES3848 Chr00 705109954 1e-110
CaES4174 Chr00 705460461 1e-111
CaES4700 Chr00 705831805 2e-56
CaES1352 Chr00 705832408 1e-132
CaES1283 Chr00 706907031 1e-94
CaES2986 Chr00 710500502 1e-113
CaES2159 Chr00 712017384 1e-148
CaES3610 Chr00 712452318 1e-126
CaES3283 Chr00 712804115 2e-58
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604


MarkerDB | Capsicum annuum