Pepper Marker Database

Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS) list : Chr00

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Zunla-1_Release_2.0, Qin et al. 2014 PNAS)

Total Entries: 604


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Zunla-1_Release_2.0)		 Evalue
Name Position*
CaES5168 Chr00 303076450 1e-150
CaES5179 Chr00 413231386 1e-120
CaES5204 Chr00 574736244 4e-45
CaES5210 Chr00 666046386 2e-58
CaES5215 Chr00 566975713 1e-97
CaES5218 Chr00 618820425 2e-79
CaES5231 Chr00 499763546 2e-53
CaES5239 Chr00 611858261 1e-103
CaES5249 Chr00 399577831 5e-44
CaES5260 Chr00 314411632 6e-26
CaES5267 Chr00 648154468 1e-102
CaES5269 Chr00 313947189 2e-69
CaES5281 Chr00 545793967 1e-117
CaES5285 Chr00 545698398 1e-106
CaES5289 Chr00 618854514 2e-42
CaES5300 Chr00 470904633 1e-62
CaES5305 Chr00 599835228 2e-59
CaES5323 Chr00 266108840 7e-86
CaES5341 Chr00 317602877 2e-52
CaES5360 Chr00 197215244 8e-68
CaES5373 Chr00 444514767 8e-54
CaES5388 Chr00 426404622 5e-39
CaES5399 Chr00 436810151 4e-97
CaES5404 Chr00 186110298 3e-32
CaES5417 Chr00 623249750 6e-33
CaES5422 Chr00 650719426 1e-50
CaES5424 Chr00 456816690 1e-100
CaES5442 Chr00 185479697 6e-59
CaES5449 Chr00 197623264 3e-65
CaES5459 Chr00 652264628 1e-45
CaES5461 Chr00 669655990 3e-91
CaES5476 Chr00 507880566 4e-61
CaES5488 Chr00 535139680 2e-53
CaES5496 Chr00 311670855 2e-64
CaES5510 Chr00 455207967 1e-40
CaES5526 Chr00 247301564 3e-85
CaES5551 Chr00 450669576 1e-73
CaES5571 Chr00 538805952 4e-58
CaES5578 Chr00 646062015 2e-73
CaES5596 Chr00 647215404 9e-42
CaES5601 Chr00 553038236 2e-45
CaES5612 Chr00 661649237 9e-24
CaES5620 Chr00 522421368 4e-97
CaES5642 0.0 192 Chr00 572299887 1e-70
CaES5647 0.0 189 Chr00 446199816 1e-143
CaES5660 Chr00 435373299 1e-32
CaES5681 Chr00 600361282 1e-132
CaES5691 Chr00 154179092 3e-99
CaES5700 Chr00 646179501 6e-82
CaES5703 Chr00 428869273 2e-86
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 604

MarkerDB | Capsicum annuum