Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr12

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 384


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Pepper.v.1.5)		 Evalue
Name Position*
CaES5219 Pepper.v.1.5.chr12 126442808 4e-56
CaES5222 Pepper.v.1.5.chr12 229512108 1e-76
CaES5234 Pepper.v.1.5.chr12 223203574 3e-69
CaES5238 Pepper.v.1.5.chr12 231936777 1e-125
CaES5251 Pepper.v.1.5.chr12 10718944 3e-27
CaES5276 Pepper.v.1.5.chr12 228346 2e-44
CaES5287 Pepper.v.1.5.chr12 778457 1e-66
CaES5295 Pepper.v.1.5.chr12 79825215 1e-122
CaES5312 Pepper.v.1.5.chr12 194550731 1e-58
CaES5323 Pepper.v.1.5.chr12 2716096 7e-77
CaES5325 Pepper.v.1.5.chr12 206987303 1e-125
CaES5327 Pepper.v.1.5.chr12 189839817 1e-101
CaES5328 Pepper.v.1.5.chr12 126073225 1e-114
CaES5355 Pepper.v.1.5.chr12 231361083 1e-101
CaES5360 Pepper.v.1.5.chr12 125205 6e-68
CaES5370 Pepper.v.1.5.chr12 82166642 3e-98
CaES5439 Pepper.v.1.5.chr12 67440388 2e-97
CaES5444 Pepper.v.1.5.chr12 204860738 4e-41
CaES5447 Pepper.v.1.5.chr12 198086258 1e-21
CaES5473 Pepper.v.1.5.chr12 213249087 7e-66
CaES5476 Pepper.v.1.5.chr12 29978480 1e-61
CaES5484 Pepper.v.1.5.chr12 210175240 1e-46
CaES5500 Pepper.v.1.5.chr12 231902905 3e-84
CaES5514 Pepper.v.1.5.chr12 220651927 6e-71
CaES5520 Pepper.v.1.5.chr12 3183005 7e-70
CaES5522 Pepper.v.1.5.chr12 5341816 1e-110
CaES5532 Pepper.v.1.5.chr12 95887376 1e-45
CaES5546 Pepper.v.1.5.chr12 230599722 2e-55
CaES5561 Pepper.v.1.5.chr12 102720812 2e-77
CaES5641 Pepper.v.1.5.chr12 11004 1e-103
CaES5653 Pepper.v.1.5.chr12 203484122 1e-149
CaES5672 Pepper.v.1.5.chr12 14183575 1e-118
CaES5688 Pepper.v.1.5.chr12 16715064 1e-145
CaES5720 Pepper.v.1.5.chr12 196781796 2e-67
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 384

MarkerDB | Capsicum annuum