Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 256

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
Name Position*
CaES5666 Pepper.v.1.5.chr09 211920951 8e-29
CaES5674 Pepper.v.1.5.chr09 101068278 1e-100
CaES5712 Pepper.v.1.5.chr09 223086466 3e-82
CaES5717 Pepper.v.1.5.chr09 222606455 1e-123
CaES5744 Pepper.v.1.5.chr09 232030708 5e-77
CaES5749 Pepper.v.1.5.chr09 9679894 8e-72
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 256

MarkerDB | Capsicum annuum