Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr09

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 256

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
Name Position*
CaES0409 Pepper.v.1.5.chr09 245967861 5e-79
CaES4889 Pepper.v.1.5.chr09 246112153 5e-59
CaES3710 Pepper.v.1.5.chr09 246276860 1e-142
CaES2673 Pepper.v.1.5.chr09 246323902 1e-125
CaES5521 Pepper.v.1.5.chr09 247097960 1e-65
CaES0432 Pepper.v.1.5.chr09 247700078 4e-59
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 256

MarkerDB | Capsicum annuum