Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr08

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 273

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
Name Position*
CaES4957 Pepper.v.1.5.chr08 86229669 1e-37
CaES5009 Pepper.v.1.5.chr08 1031234 1e-122
CaES5079 Pepper.v.1.5.chr08 85794649 1e-114
CaES5108 Pepper.v.1.5.chr08 131825752 1e-66
CaES5157 Pepper.v.1.5.chr08 52372359 5e-49
CaES5189 Pepper.v.1.5.chr08 133829122 1e-143
CaES5200 Pepper.v.1.5.chr08 114009858 6e-80
CaES5221 Pepper.v.1.5.chr08 124057870 5e-95
CaES5296 Pepper.v.1.5.chr08 43480696 2e-90
CaES5297 Pepper.v.1.5.chr08 127241511 6e-61
CaES5298 Pepper.v.1.5.chr08 128340799 3e-29
CaES5332 Pepper.v.1.5.chr08 61898199 2e-22
CaES5344 Pepper.v.1.5.chr08 65448035 5e-82
CaES5366 Pepper.v.1.5.chr08 123534931 1e-103
CaES5455 Pepper.v.1.5.chr08 127249674 7e-95
CaES5489 Pepper.v.1.5.chr08 116872479 3e-88
CaES5606 Pepper.v.1.5.chr08 1105573 2e-38
CaES5627 Pepper.v.1.5.chr08 125132614 1e-95
CaES5629 Pepper.v.1.5.chr08 122404054 2e-73
CaES5639 Pepper.v.1.5.chr08 567044 1e-102
CaES5640 Pepper.v.1.5.chr08 133198185 4e-94
CaES5702 Pepper.v.1.5.chr08 123481355 1e-108
CaES5713 Pepper.v.1.5.chr08 123303859 6e-55
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 273

MarkerDB | Capsicum annuum