Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr07

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 409


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Pepper.v.1.5)		 Evalue
Name Position*
CaES5633 Pepper.v.1.5.chr07 93524914 1e-119
CaES5657 Pepper.v.1.5.chr07 149774606 1e-111
CaES5665 Pepper.v.1.5.chr07 11633335 1e-146
CaES5668 Pepper.v.1.5.chr07 191904662 1e-110
CaES5670 Pepper.v.1.5.chr07 225722459 1e-116
CaES5675 Pepper.v.1.5.chr07 224878107 9e-47
CaES5695 Pepper.v.1.5.chr07 84113195 4e-98
CaES5726 Pepper.v.1.5.chr07 203805906 3e-53
CaES5738 Pepper.v.1.5.chr07 5654523 7e-60
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 409

MarkerDB | Capsicum annuum