Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr05

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 295


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Pepper.v.1.5)		 Evalue
Name Position*
CaES4752 Pepper.v.1.5.chr05 34920809 8e-36
CaES4790 Pepper.v.1.5.chr05 25165181 1e-139
CaES4826 Pepper.v.1.5.chr05 220136664 7e-48
CaES4844 Pepper.v.1.5.chr05 551940 1e-79
CaES4853 Pepper.v.1.5.chr05 173155437 1e-86
CaES4884 Pepper.v.1.5.chr05 216056830 1e-59
CaES4901 Pepper.v.1.5.chr05 993048 1e-116
CaES4909 Pepper.v.1.5.chr05 135630521 1e-130
CaES4922 Pepper.v.1.5.chr05 13453926 5e-25
CaES4940 Pepper.v.1.5.chr05 214434116 1e-115
CaES4945 Pepper.v.1.5.chr05 208980720 2e-78
CaES4956 Pepper.v.1.5.chr05 181366117 1e-122
CaES4983 Pepper.v.1.5.chr05 193281430 1e-137
CaES5003 Pepper.v.1.5.chr05 8979183 1e-129
CaES5004 Pepper.v.1.5.chr05 136203964 3e-33
CaES5005 Pepper.v.1.5.chr05 1021042 1e-138
CaES5051 Pepper.v.1.5.chr05 125832253 9e-41
CaES5067 Pepper.v.1.5.chr05 48928361 1e-112
CaES5093 Pepper.v.1.5.chr05 17443649 1e-136
CaES5098 Pepper.v.1.5.chr05 987707 9e-46
CaES5099 Pepper.v.1.5.chr05 220385498 1e-141
CaES5123 Pepper.v.1.5.chr05 6849656 9e-95
CaES5127 Pepper.v.1.5.chr05 219266569 1e-129
CaES5145 Pepper.v.1.5.chr05 51946954 1e-133
CaES5171 Pepper.v.1.5.chr05 210478650 1e-152
CaES5237 Pepper.v.1.5.chr05 1093750 2e-47
CaES5267 Pepper.v.1.5.chr05 16268770 1e-103
CaES5284 Pepper.v.1.5.chr05 63889941 1e-125
CaES5294 Pepper.v.1.5.chr05 200053473 1e-138
CaES5308 Pepper.v.1.5.chr05 1017312 7e-96
CaES5315 Pepper.v.1.5.chr05 219570500 3e-73
CaES5338 Pepper.v.1.5.chr05 165518552 4e-76
CaES5358 Pepper.v.1.5.chr05 208223034 4e-88
CaES5365 Pepper.v.1.5.chr05 2050177 1e-102
CaES5394 Pepper.v.1.5.chr05 42933575 2e-40
CaES5497 Pepper.v.1.5.chr05 210967633 2e-63
CaES5529 Pepper.v.1.5.chr05 186534165 4e-47
CaES5559 Pepper.v.1.5.chr05 1867487 8e-46
CaES5602 Pepper.v.1.5.chr05 7191196 1e-125
CaES5613 Pepper.v.1.5.chr05 31705696 1e-135
CaES5648 Pepper.v.1.5.chr05 139139775 7e-32
CaES5669 Pepper.v.1.5.chr05 78664293 3e-89
CaES5673 Pepper.v.1.5.chr05 7779702 1e-80
CaES5681 Pepper.v.1.5.chr05 157615406 1e-131
CaES5686 Pepper.v.1.5.chr05 187984907 2e-94
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 295

MarkerDB | Capsicum annuum