Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 307


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Pepper.v.1.5)
Evalue
Name Position*
CaES2065 Pepper.v.1.5.chr04 205682834 1e-142
CaES4019 Pepper.v.1.5.chr04 205787997 5e-97
CaES1947 Pepper.v.1.5.chr04 206110724 1e-138
CaES1080 Pepper.v.1.5.chr04 206149483 2e-23
CaES2298 Pepper.v.1.5.chr04 206277547 1e-73
CaES0956 Pepper.v.1.5.chr04 206307956 4e-68
CaES2020 Pepper.v.1.5.chr04 206307956 6e-68
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 307


MarkerDB | Capsicum annuum