Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr04

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 307


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Pepper.v.1.5)		 Evalue
Name Position*
CaES5538 Pepper.v.1.5.chr04 51294979 3e-89
CaES5545 Pepper.v.1.5.chr04 204928733 3e-80
CaES5599 Pepper.v.1.5.chr04 197352611 1e-81
CaES5658 Pepper.v.1.5.chr04 728323 1e-119
CaES5698 Pepper.v.1.5.chr04 9030066 1e-104
CaES5708 Pepper.v.1.5.chr04 205635377 4e-25
CaES5736 Pepper.v.1.5.chr04 5780310 1e-100
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 307

MarkerDB | Capsicum annuum