Pepper Marker Database

Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet) list : Pepper.v.1.5.chr02

Order of Pepper markers and Pepper gene models

Pepper markers on the Pepper genome (Pepper.v.1.5, Kim et al. 2014 Nat Genet)

Total Entries: 549


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name PIC value PIC lines Genome
(Pepper.v.1.5)		 Evalue
Name Position*
CaES5177 Pepper.v.1.5.chr02 108238112 1e-113
CaES5206 Pepper.v.1.5.chr02 1955625 1e-114
CaES5216 Pepper.v.1.5.chr02 161643974 6e-73
CaES5224 Pepper.v.1.5.chr02 162438570 1e-122
CaES5227 Pepper.v.1.5.chr02 161152388 1e-133
CaES5232 Pepper.v.1.5.chr02 162439174 1e-118
CaES5264 Pepper.v.1.5.chr02 163464382 6e-95
CaES5282 Pepper.v.1.5.chr02 141611844 1e-117
CaES5340 Pepper.v.1.5.chr02 142628340 1e-106
CaES5342 Pepper.v.1.5.chr02 154057205 9e-36
CaES5347 Pepper.v.1.5.chr02 154631750 2e-21
CaES5352 Pepper.v.1.5.chr02 53378825 1e-105
CaES5395 Pepper.v.1.5.chr02 137942540 6e-81
CaES5418 Pepper.v.1.5.chr02 77462863 4e-50
CaES5427 Pepper.v.1.5.chr02 150137718 1e-85
CaES5429 Pepper.v.1.5.chr02 154025922 6e-95
CaES5430 Pepper.v.1.5.chr02 8082568 5e-79
CaES5440 Pepper.v.1.5.chr02 163204520 1e-79
CaES5446 Pepper.v.1.5.chr02 135232824 9e-35
CaES5453 Pepper.v.1.5.chr02 157391544 1e-94
CaES5463 Pepper.v.1.5.chr02 161739871 4e-58
CaES5464 Pepper.v.1.5.chr02 163280214 1e-37
CaES5467 Pepper.v.1.5.chr02 129992660 3e-70
CaES5469 Pepper.v.1.5.chr02 165362193 7e-80
CaES5482 Pepper.v.1.5.chr02 115145414 1e-107
CaES5499 Pepper.v.1.5.chr02 155207494 1e-42
CaES5506 Pepper.v.1.5.chr02 161838154 9e-82
CaES5519 Pepper.v.1.5.chr02 150854077 1e-91
CaES5530 Pepper.v.1.5.chr02 163203155 6e-31
CaES5534 Pepper.v.1.5.chr02 132198662 4e-39
CaES5540 Pepper.v.1.5.chr02 141528774 5e-70
CaES5553 Pepper.v.1.5.chr02 142280586 3e-51
CaES5555 Pepper.v.1.5.chr02 166099474 5e-53
CaES5562 Pepper.v.1.5.chr02 146159733 2e-56
CaES5563 Pepper.v.1.5.chr02 108088042 4e-81
CaES5566 Pepper.v.1.5.chr02 158596318 1e-97
CaES5581 Pepper.v.1.5.chr02 102315790 8e-92
CaES5595 Pepper.v.1.5.chr02 135688616 1e-90
CaES5598 Pepper.v.1.5.chr02 164475985 2e-84
CaES5624 Pepper.v.1.5.chr02 41590890 1e-108
CaES5626 Pepper.v.1.5.chr02 63678423 4e-74
CaES5652 Pepper.v.1.5.chr02 155883132 1e-122
CaES5659 Pepper.v.1.5.chr02 148634371 5e-93
CaES5667 Pepper.v.1.5.chr02 52880022 2e-71
CaES5703 Pepper.v.1.5.chr02 165597908 1e-86
CaES5704 Pepper.v.1.5.chr02 164248022 2e-87
CaES5709 Pepper.v.1.5.chr02 70356223 1e-120
CaES5721 Pepper.v.1.5.chr02 124372012 1e-129
CaES5730 Pepper.v.1.5.chr02 101885212 3e-23
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 549

MarkerDB | Capsicum annuum