| Marker name | AHS2312 | ||
|---|---|---|---|
| Marker category | EST-SSR | ||
| Primer sequences | Fw | CTTACCCACCAATTCTTCGC | |
| Rv | TTGCTTCAGCAAAGTCAACG | ||
| EST/Genome sequences | AHCL17H22 | ||
| Lines | |||
| PIC | Value | ||
| Lines | |||
| Map | SKF2 | Linkage | LG04.1 |
| Position | 76.98 | ||
| TF6 | Linkage | TA04 | |
| Position | 31.842 | ||
| TF6 | Linkage | TB04 | |
| Position | 50.496 | ||
| Integrated consensus map | Linkage | A04 | |
| Position | 28.201 | ||
| Integrated consensus map | Linkage | B04 | |
| Position | 42.212 | ||
| SNP | Position | ||
| Method | |||
| SSR | Fragment size | 200 | |
| Pattern* | GGT(mis1) | ||
| Repeat count | 7 | ||
| Method | PCR | ||
| Detection | |||
| Multiplex | |||
| Gel image |
AHS2301_2325.ppt [download] |
||
| Enzyme | |||
| Related markers | Marker name | ||
| Species | |||
| Comments | Koilkonda et al. (2012) | ||
* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.