| Marker name | AHS1480 | ||
|---|---|---|---|
| Marker category | EST-SSR | ||
| Primer sequences | Fw | TGGGCTCCAACAATACAACA | |
| Rv | TGTGTACAGGCATCATCGGT | ||
| EST/Genome sequences | AHCG05G15 | ||
| Lines | |||
| PIC | Value | ||
| Lines | |||
| Map | SKF2 | Linkage | LG07.2 |
| Position | 88.139 | ||
| BF6 | Linkage | BB07 | |
| Position | 33.958 | ||
| BF6 | Linkage | BB07 | |
| Position | 36.63 | ||
| Integrated consensus map | Linkage | B07 | |
| Position | 80.803 | ||
| Integrated consensus map | Linkage | B07 | |
| Position | 88.437 | ||
| Integrated consensus map | Linkage | B07 | |
| Position | 90.574 | ||
| SNP | Position | ||
| Method | |||
| SSR | Fragment size | 233 | |
| Pattern* | AAT(mis2) | ||
| Repeat count | 5 | ||
| Method | PCR | ||
| Detection | |||
| Multiplex | |||
| Gel image |
AHS1476_1500.ppt [download] |
||
| Enzyme | |||
| Related markers | Marker name | ||
| Species | |||
| Comments | Koilkonda et al. (2012) | ||
* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.