| Marker name | AHS0888 | ||
|---|---|---|---|
| Marker category | EST-SSR | ||
| Primer sequences | Fw | AGGAAGCGGATACCACACAG | |
| Rv | GATTAAACCGCCAACAAGGA | ||
| EST/Genome sequences | AHCS01M09 | ||
| Lines | |||
| PIC | Value | ||
| Lines | |||
| Map | AF5 | Linkage | AA02 |
| Position | 27.474 | ||
| BF6 | Linkage | BB02 | |
| Position | 18.121 | ||
| Integrated consensus map | Linkage | A02 | |
| Position | 47.442 | ||
| Integrated consensus map | Linkage | B02 | |
| Position | 68.962 | ||
| SNP | Position | ||
| Method | |||
| SSR | Fragment size | 204 | |
| Pattern* | AATT(mis2) | ||
| Repeat count | 4 | ||
| Method | PCR | ||
| Detection | |||
| Multiplex | |||
| Gel image |
AHS0876_0900.ppt [download] |
||
| Enzyme | |||
| Related markers | Marker name | ||
| Species | |||
| Comments | Koilkonda et al. (2012) | ||
* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.