Marker name | AHGS1980 | ||
---|---|---|---|
Marker category | Genome-SSR | ||
Primer sequences | Fw | TTTCCATCGGATTTTTCGTC | |
Rv | GAGGTGGCAACGGTGATAGT | ||
EST/Genome sequences | SAAC11M13 | ||
Lines | |||
PIC | Value | ||
Lines | |||
Map | SKF2 | Linkage | LG07.1 |
Position | 92.164 | ||
NYF2 | Linkage | LG07.1 | |
Position | 97.489 | ||
BF6 | Linkage | BB08 | |
Position | 19.077 | ||
BF6 | Linkage | BB05 | |
Position | 16.318 | ||
BF6 | Linkage | BB07 | |
Position | 34.569 | ||
TF6 | Linkage | TA07 | |
Position | 33.147 | ||
Integrated consensus map | Linkage | A07 | |
Position | 73.105 | ||
Integrated consensus map | Linkage | B05 | |
Position | 48.746 | ||
Integrated consensus map | Linkage | B07 | |
Position | 89.567 | ||
Integrated consensus map | Linkage | B08 | |
Position | 60.609 | ||
SNP | Position | ||
Method | |||
SSR | Fragment size | 230 | |
Pattern* | AG | ||
Repeat count | 17 | ||
Method | PCR | ||
Detection | |||
Multiplex | |||
Gel image | |||
Enzyme | |||
Related markers | Marker name | ||
Species | |||
Comments | Shirasawa et al. (2012) |
* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.