Faba bean Marker Database

FBES0540 Information

Marker name FBES0540
Marker category EST-SSR
Primer sequences Fw AGGCCCAAATTTCTCTCCAT
Rv TTGGTGGTGGAGAAGAGGAC
EST/Genome sequences VfEES05C05
Lines
PIC Value
Lines
Integrated Map Locus FBES0540_LG1a
Linkage LG1
Position 113.158
Integrated Map Locus FBES0540_LG1b
Linkage LG1
Position 118.475
Integrated Map Locus FBES0540_LG1c
Linkage LG1
Position 151.938
Integrated Map Locus FBES0540_LG4
Linkage LG4
Position 100.313
SNP Position
Method
SSR Fragment size 115
Pattern* ATC(mis2)
Repeat count 6
Method PCR Modified Touchdown [Sato et al. DNA Research 12, 301–364 (205)]
Detection
Multiplex
Gel image FBES0513-0640.ppt [download]
Enzyme
Related markers Marker name
Species
Comments

* "mis1" and "mis2" in parenthesis indicate imperfect SSR motifs having 1- and 2-base mismatches in the SSR regions, respectively. Perfect SSR motifs have no descriptions.


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