Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS1888 chr5 26061370 8e-61
RSS1889 chr5 21551791 7e-56
RSS1894 chr5 22390013 6e-75
RSS1899 chr5 19350242 1e-114 LG7 86.4
RSS1904 chr5 6559463 3e-78
RSS1915 chr5 22171287 3e-51
RSS1920 chr5 2853651 1e-74
RSS1923 chr5 8355271 3e-80
RSS1926 chr5 18245024 2e-45
RSS1931 chr5 6729339 1e-36 LG8 66.9
RSS1932 chr5 24685256 2e-75
RSS1933 chr5 25737303 6e-21
RSS1943 chr5 5261308 2e-42
RSS1947 chr5 24828183 2e-84
RSS1953 chr5 8590692 6e-64
RSS1956 chr5 310682 1e-126
RSS1958 chr5 22819064 8e-78
RSS1961 chr5 12115783 7e-47
RSS1969 chr5 25590996 4e-73
RSS1970 chr5 26338593 6e-86
RSS1971 chr5 24744191 5e-82 LG4 113.0
RSS1982 chr5 9492184 6e-52
RSS1989 chr5 7524756 1e-120
RSS1992 chr5 832395 1e-84
RSS1994 chr5 19805044 3e-95
RSS1997 chr5 4308853 2e-93
RSS1999 chr5 1588581 1e-58
RSS2007 chr5 25070122 4e-86
RSS2009 chr5 24914418 1e-82
RSS2020 chr5 20882816 3e-94
RSS2022 chr5 23452466 3e-35
RSS2027 chr5 19789521 5e-41
RSS2028 chr5 4249753 2e-40
RSS2043 chr5 25435135 2e-72
RSS2048 chr5 22421937 5e-80
RSS2054 chr5 1549124 2e-80
RSS2059 chr5 3047375 2e-39
RSS2062 chr5 21784754 2e-53
RSS2067 chr5 3955136 2e-55
RSS2068 chr5 7249943 1e-50
RSS2078 chr5 24835252 3e-65 LG2 40.8
RSS2078_a chr5 24835252 3e-65 LG3 128.2
RSS2082 chr5 24930413 6e-62
RSS2083 chr5 16290791 1e-114
RSS2101 chr5 25017695 9e-46
RSS2105 chr5 19285030 2e-60
RSS2108 chr5 5362103 1e-44 LG8 71.5
RSS2109 chr5 26809650 8e-81
RSS2110 chr5 8774338 2e-77
RSS2112 chr5 22397193 9e-61 LG6 52.1
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus