Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS1616 chr5 10856822 2e-62
RSS1622 chr5 6267319 6e-58
RSS1633 chr5 22374387 1e-73
RSS1634 chr5 23031970 5e-56
RSS1636 chr5 8541846 4e-61 LG4 109.6
RSS1637 chr5 25150825 2e-59
RSS1639 chr5 26955215 4e-90
RSS1641 chr5 19328379 5e-46
RSS1669 chr5 24480632 1e-63
RSS1672 chr5 8496493 7e-65
RSS1681 chr5 19550439 8e-80
RSS1683 chr5 21413715 3e-93
RSS1691 chr5 10044872 8e-60
RSS1702 chr5 1503606 2e-78
RSS1703 chr5 8558758 1e-55
RSS1712 chr5 21356583 5e-67
RSS1717 chr5 4047113 1e-64
RSS1723 chr5 8589484 1e-116
RSS1733 chr5 4156795 1e-84
RSS1740 chr5 24480608 1e-63
RSS1742 chr5 8756654 1e-109
RSS1743 chr5 6582465 4e-77 LG8 67.3
RSS1750 chr5 4785335 1e-77
RSS1751 chr5 25053984 2e-44
RSS1752 chr5 6852037 1e-58 LG1 73.0
RSS1758 chr5 6582021 3e-78 LG1 107.4
RSS1758_a chr5 6582021 3e-78 LG5 64.6
RSS1774 chr5 24022838 3e-24 LG3 110.8
RSS1779 chr5 16610302 6e-67
RSS1784 chr5 6177966 2e-96
RSS1786 chr5 55278 5e-22 LG1 109.2
RSS1790 chr5 23181215 2e-30 LG6 42.7
RSS1792 chr5 9781545 7e-73
RSS1800 chr5 7110480 2e-71
RSS1805 chr5 19137014 2e-70
RSS1814 chr5 1499440 7e-78
RSS1820 chr5 25223426 7e-61
RSS1822 chr5 652527 9e-59
RSS1829 chr5 22348947 5e-41
RSS1830 chr5 25901958 7e-44
RSS1834 chr5 693888 8e-81
RSS1840 chr5 693888 4e-80
RSS1849 chr5 5904194 1e-125
RSS1851 chr5 10031266 5e-46
RSS1854 chr5 13178016 5e-61
RSS1858 chr5 3464860 1e-111
RSS1861 chr5 19169777 1e-25
RSS1866 chr5 4253644 1e-86
RSS1870 chr5 23725021 2e-79 LG6 39.8
RSS1881 chr5 24007587 4e-63
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus