Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS0774 chr5 8774245 1e-52
RSS2110 chr5 8774338 2e-77
RSS1001 chr5 8795420 1e-120
RSS1158 chr5 8864969 2e-86
RSS2320 chr5 8953597 1e-118 LG4 107.7
RSS2629 chr5 8954844 1e-107
RSS3631 chr5 9054386 5e-26
RSS0771 chr5 9097948 2e-83
RSS3959 chr5 9266981 1e-117
RSS2603 chr5 9288220 4e-59
RSS1062 chr5 9377602 3e-91
RSS0031 chr5 9401323 7e-86 LG4 124.6
RSS3211 chr5 9481672 2e-51
RSS1982 chr5 9492184 6e-52
RSS2575 chr5 9498906 9e-55 LG6 122.5
RSS2145 chr5 9670382 6e-78
RSS0584 chr5 9715745 1e-94
RSS1228 chr5 9715745 4e-84
RSS1792 chr5 9781545 7e-73
RSS3127 chr5 9788298 5e-91
RSS3104 chr5 9820536 1e-68
RSS1301 chr5 9944510 7e-85 LG6 123.1
RSS1851 chr5 10031266 5e-46
RSS0513 chr5 10044400 1e-85
RSS1691 chr5 10044872 8e-60
RSS0091 chr5 10136018 8e-93
RSS0316 chr5 10136360 4e-65
RSS2618 chr5 10541177 1e-114
RSS3814 chr5 10675807 8e-47
RSS3408 chr5 10678618 6e-95
RSS1413 chr5 10796848 1e-27
RSS0096 chr5 10796995 2e-38
RSS1616 chr5 10856822 2e-62
RSS2844 chr5 10926823 3e-61
RSS3174 chr5 12078031 1e-49 LG7 36.7
RSS3638 chr5 12078031 2e-52 LG9 26.4
RSS1961 chr5 12115783 7e-47
RSS0443 chr5 12272164 1e-55
RSS0015 chr5 12589833 3e-53 LG7 79.3
RSS1854 chr5 13178016 5e-61
RSS3871 chr5 13415968 1e-146
RSS3043 chr5 13584825 2e-76 LG3 73.7
RSS0729 chr5 13831277 1e-91
RSS0262 chr5 13868087 4e-42
RSS0880 chr5 13902934 5e-95
RSS0380 chr5 13912307 8e-55 LG3 111.9
RSS3837 chr5 14135506 1e-53
RSS1555 chr5 14482924 1e-68
RSS0188 chr5 14595500 2e-60
RSS0553 chr5 14632854 1e-74 LG1 54.4
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus