Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS1351 chr5 8367180 2e-48
RSS1352 chr5 693888 4e-80
RSS1363 chr5 14982573 4e-50
RSS1365 chr5 1389208 1e-71
RSS1372 chr5 26237406 2e-65
RSS1374 chr5 3270891 3e-83 LG5 134.4
RSS1384 chr5 4391773 1e-108
RSS1389 chr5 865090 5e-21
RSS1390 chr5 26009979 2e-85
RSS1395 chr5 24362967 2e-47 LG1 75.5
RSS1401 chr5 23501135 1e-107
RSS1412 chr5 7903496 4e-53
RSS1413 chr5 10796848 1e-27
RSS1421 chr5 25665168 6e-45 LG3 124.9
RSS1423 chr5 21549861 7e-54
RSS1425 chr5 25244545 2e-92 LG6 153.2
RSS1428 chr5 2895073 6e-75
RSS1441 chr5 7006952 2e-39
RSS1443 chr5 3516769 2e-38
RSS1445 chr5 25763466 5e-37 LG3 124.3
RSS1458 chr5 4570078 2e-69
RSS1460 chr5 19385670 6e-72
RSS1464 chr5 1706519 1e-118
RSS1487 chr5 17855416 8e-97
RSS1488 chr5 426884 1e-42
RSS1493 chr5 19388987 3e-27
RSS1505 chr5 26728588 3e-92
RSS1507 chr5 24480887 5e-63
RSS1514 chr5 6688612 1e-121
RSS1523 chr5 3890321 1e-75 LG1 120.8
RSS1532 chr5 23847789 4e-67 LG6 33.6
RSS1538 chr5 18044154 1e-105
RSS1547 chr5 25110082 1e-135
RSS1548 chr5 8008754 2e-66
RSS1552 chr5 5207303 1e-111
RSS1554 chr5 7846147 4e-62
RSS1555 chr5 14482924 1e-68
RSS1569 chr5 26356011 3e-26
RSS1573 chr5 19328379 5e-46
RSS1574 chr5 711636 3e-45 LG1 109.3
RSS1576 chr5 2680822 6e-95
RSS1578 chr5 24913810 2e-83
RSS1579 chr5 16410866 1e-104
RSS1584 chr5 7394745 2e-49
RSS1590 chr5 16627816 1e-39
RSS1592 chr5 21689204 2e-43 LG6 54.5
RSS1599 chr5 3100022 4e-55
RSS1608 chr5 23299078 5e-27
RSS1613 chr5 2984224 1e-26
RSS1614 chr5 24103385 6e-64 LG5 60.8
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730


MarkerDB | Raphanus sativus