Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS0324 chr5 7279248 6e-36
RSS3219 chr5 7304415 6e-90
RSS3719 chr5 7305088 1e-106
RSS0741 chr5 7305187 2e-99
RSS0526 chr5 7305187 1e-40
RSS0796 chr5 7311613 2e-47
RSS0119 chr5 7380854 5e-98 LG5 58.4
RSS1343 chr5 7385336 8e-33
RSS1584 chr5 7394745 2e-49
RSS2666 chr5 7434257 5e-90
RSS0977 chr5 7435674 1e-125 LG8 64.4
RSS1989 chr5 7524756 1e-120
RSS1261 chr5 7534575 7e-25 LG8 64.6
RSS2747 chr5 7535872 3e-27
RSS0909 chr5 7630176 7e-33
RSS1144 chr5 7730248 4e-91
RSS1225 chr5 7738117 1e-100
RSS2780 chr5 7753674 4e-68
RSS1554 chr5 7846147 4e-62
RSS0067 chr5 7856233 5e-76 LG4 110.9
RSS1412 chr5 7903496 4e-53
RSS1308 chr5 7918055 3e-23
RSS0254 chr5 7954948 2e-76 LG2 42.2
RSS1548 chr5 8008754 2e-66
RSS2218 chr5 8044118 1e-88
RSS2446 chr5 8083414 1e-32
RSS3954 chr5 8117607 9e-21
RSS0178 chr5 8330990 2e-77 LG4 110.0
RSS0120 chr5 8354827 1e-125
RSS1923 chr5 8355271 3e-80
RSS2229 chr5 8366461 6e-79
RSS1351 chr5 8367180 2e-48
RSS3014 chr5 8372397 1e-122
RSS2216 chr5 8411554 2e-61
RSS0766 chr5 8411967 8e-72
RSS0010 chr5 8435528 3e-28
RSS2388 chr5 8456610 1e-45
RSS0397 chr5 8457627 3e-47
RSS2702 chr5 8457627 2e-45
RSS2185 chr5 8463881 6e-92
RSS1672 chr5 8496493 7e-65
RSS1636 chr5 8541846 4e-61 LG4 109.6
RSS1703 chr5 8558758 1e-55
RSS0608 chr5 8589454 1e-104
RSS1723 chr5 8589484 1e-116
RSS1953 chr5 8590692 6e-64
RSS1101 chr5 8736631 1e-58
RSS0453 chr5 8736652 2e-59
RSS2765 chr5 8737845 2e-24
RSS1742 chr5 8756654 1e-109
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730


MarkerDB | Raphanus sativus