Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS0800 chr5 19290155 9e-94
RSS0803 chr5 25572319 5e-81
RSS0809 chr5 25763952 2e-81
RSS0816 chr5 24930896 3e-42 LG8 77.4
RSS0819 chr5 23430863 6e-90
RSS0832 chr5 23660956 1e-104 LG8 69.8
RSS0849 chr5 16004749 1e-94
RSS0871 chr5 5904284 1e-131
RSS0879 chr5 23168414 9e-51
RSS0880 chr5 13902934 5e-95
RSS0882 chr5 26860753 1e-108
RSS0884 chr5 4749691 2e-56
RSS0889 chr5 26639981 8e-42
RSS0897 chr5 22218475 2e-66 LG6 52.5
RSS0903 chr5 19816497 5e-62
RSS0909 chr5 7630176 7e-33
RSS0913 chr5 17316170 7e-84 LG9 21.9
RSS0920 chr5 18698812 2e-72
RSS0921 chr5 21208945 3e-27
RSS0924 chr5 25526964 2e-25
RSS0926 chr5 5390523 1e-102
RSS0927 chr5 18410849 1e-68
RSS0932 chr5 2300967 1e-41
RSS0935 chr5 264899 5e-75
RSS0945 chr5 6990285 1e-105
RSS0961 chr5 6109331 3e-32
RSS0962 chr5 25220702 3e-65
RSS0969 chr5 20168207 4e-81
RSS0970 chr5 7107893 6e-57
RSS0976 chr5 16836558 8e-90
RSS0977 chr5 7435674 1e-125 LG8 64.4
RSS0983 chr5 19217365 5e-42
RSS1001 chr5 8795420 1e-120
RSS1010 chr5 4073335 1e-78
RSS1012 chr5 6230357 1e-81 LG1 104.8
RSS1021 chr5 5261308 5e-37
RSS1029 chr5 24480632 1e-63
RSS1031 chr5 5361942 5e-27 LG5 104.3
RSS1035 chr5 19106816 4e-26 LG6 138.9
RSS1037 chr5 5188862 6e-64
RSS1050 chr5 18045138 2e-76
RSS1052 chr5 25386123 1e-108
RSS1061 chr5 14913201 5e-99 LG4 76.0
RSS1062 chr5 9377602 3e-91
RSS1067 chr5 22727557 5e-92
RSS1068 chr5 25660931 1e-103
RSS1069 chr5 19609972 2e-88
RSS1072 chr5 1682607 1e-99
RSS1073 chr5 19217218 3e-75
RSS1074 chr5 17712427 1e-120
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus