Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS0735 chr5 4456015 4e-62
RSS3232 chr5 4474030 3e-85
RSS0632 chr5 4532289 3e-87
RSS1458 chr5 4570078 2e-69
RSS2399 chr5 4636432 4e-29
RSS0062 chr5 4637630 2e-69
RSS3161 chr5 4649085 1e-75
RSS2580 chr5 4649899 8e-71
RSS2688 chr5 4674724 1e-77
RSS3967 chr5 4681532 4e-51
RSS0287 chr5 4709550 9e-27
RSS3664 chr5 4728158 7e-98
RSS0884 chr5 4749691 2e-56
RSS1750 chr5 4785335 1e-77
RSS2732 chr5 4873238 7e-86
RSS3732 chr5 4898859 3e-71
RSS3726 chr5 4899379 8e-72
RSS0695 chr5 4938566 1e-93
RSS0278 chr5 4980730 1e-80
RSS1194 chr5 4995793 6e-49 LG1 99.0
RSS1305 chr5 5013152 6e-85
RSS2820 chr5 5039712 1e-53
RSS2918 chr5 5092200 1e-127
RSS3961 chr5 5183207 1e-104
RSS1037 chr5 5188862 6e-64
RSS1552 chr5 5207303 1e-111
RSS3816 chr5 5228774 2e-80
RSS0689 chr5 5245390 3e-76
RSS1021 chr5 5261308 5e-37
RSS1943 chr5 5261308 2e-42
RSS2530 chr5 5324414 5e-72
RSS0510 chr5 5358451 1e-97
RSS1031 chr5 5361942 5e-27 LG5 104.3
RSS2108 chr5 5362103 1e-44 LG8 71.5
RSS0926 chr5 5390523 1e-102
RSS3588 chr5 5432741 2e-92
RSS2495 chr5 5465929 1e-41
RSS3170 chr5 5465929 7e-40
RSS0403 chr5 5499705 1e-108 LG1 103.2
RSS2258 chr5 5537523 1e-71
RSS2744 chr5 5576671 1e-101 LG1 103.6
RSS3823 chr5 5686493 2e-34
RSS3630 chr5 5718886 4e-65
RSS1145 chr5 5758232 6e-95
RSS1849 chr5 5904194 1e-125
RSS0871 chr5 5904284 1e-131
RSS3383 chr5 5992382 6e-39
RSS0725 chr5 5992382 1e-33
RSS3923 chr5 5997046 6e-32
RSS2166 chr5 6009198 4e-51
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus