Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS0573 chr5 22664286 9e-75
RSS0576 chr5 310460 2e-39
RSS0584 chr5 9715745 1e-94
RSS0596 chr5 18479075 2e-39 LG8 30.2
RSS0598 chr5 15760608 8e-32
RSS0602 chr5 20691241 3e-65
RSS0603 chr5 17623398 6e-90 LG6 143.7
RSS0608 chr5 8589454 1e-104
RSS0611 chr5 3053922 7e-34
RSS0613 chr5 1288533 5e-86
RSS0622 chr5 1696618 5e-50
RSS0624 chr5 7265451 1e-78
RSS0632 chr5 4532289 3e-87
RSS0640 chr5 25423448 6e-40 LG3 122.8
RSS0648 chr5 19699241 2e-83
RSS0651 chr5 25098260 6e-38
RSS0652 chr5 26418943 1e-84
RSS0657 chr5 21870959 5e-65
RSS0658 chr5 16484308 2e-45
RSS0659 chr5 21070315 1e-107
RSS0660 chr5 25116299 2e-24 LG2 96.9
RSS0671 chr5 22494583 2e-86
RSS0672 chr5 22936696 3e-69
RSS0676 chr5 3860765 5e-69
RSS0682 chr5 14897634 6e-82
RSS0684 chr5 16080908 1e-78
RSS0689 chr5 5245390 3e-76
RSS0692 chr5 7277669 9e-58 LG8 66.3
RSS0694 chr5 16826839 1e-109
RSS0695 chr5 4938566 1e-93
RSS0706 chr5 21607532 7e-62 LG6 54.9
RSS0709 chr5 25562911 3e-96
RSS0713 chr5 4058745 9e-73
RSS0715 chr5 25052583 4e-58 LG5 109.8
RSS0725 chr5 5992382 1e-33
RSS0727 chr5 24951796 4e-68 LG2 39.8
RSS0729 chr5 13831277 1e-91
RSS0735 chr5 4456015 4e-62
RSS0741 chr5 7305187 2e-99
RSS0744 chr5 711826 1e-52
RSS0756 chr5 3498636 1e-132
RSS0766 chr5 8411967 8e-72
RSS0767 chr5 25677154 1e-52
RSS0771 chr5 9097948 2e-83
RSS0774 chr5 8774245 1e-52
RSS0781 chr5 26449548 1e-100
RSS0783 chr5 24373699 6e-57
RSS0785 chr5 18409789 1e-69
RSS0796 chr5 7311613 2e-47
RSS0798 chr5 25465045 1e-104
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730


MarkerDB | Raphanus sativus