Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS3772 chr5 16069507 2e-51 LG4 97.8
RSS2320 chr5 8953597 1e-118 LG4 107.7
RSS1636 chr5 8541846 4e-61 LG4 109.6
RSS0178 chr5 8330990 2e-77 LG4 110.0
RSS0067 chr5 7856233 5e-76 LG4 110.9
RSS1971 chr5 24744191 5e-82 LG4 113.0
RSS0031 chr5 9401323 7e-86 LG4 124.6
RSS3138 chr5 20833352 8e-61 LG5 18.5
RSS2889 chr5 20902362 3e-68 LG5 28.4
RSS2308 chr5 6815067 3e-29 LG5 55.6
RSS0119 chr5 7380854 5e-98 LG5 58.4
RSS3736 chr5 24432645 1e-122 LG5 59.1
RSS2394 chr5 24373804 4e-47 LG5 59.6
RSS1341 chr5 24386421 8e-43 LG5 59.7
RSS1076 chr5 24373804 6e-89 LG5 60.1
RSS1614 chr5 24103385 6e-64 LG5 60.8
RSS1758_a chr5 6582021 3e-78 LG5 64.6
RSS1031 chr5 5361942 5e-27 LG5 104.3
RSS0715 chr5 25052583 4e-58 LG5 109.8
RSS1374 chr5 3270891 3e-83 LG5 134.4
RSS1532 chr5 23847789 4e-67 LG6 33.6
RSS0225 chr5 24144550 1e-61 LG6 35.1
RSS3830 chr5 24103407 5e-50 LG6 37.4
RSS1337 chr5 23834400 9e-85 LG6 39.0
RSS1870 chr5 23725021 2e-79 LG6 39.8
RSS1790 chr5 23181215 2e-30 LG6 42.7
RSS2112 chr5 22397193 9e-61 LG6 52.1
RSS0897 chr5 22218475 2e-66 LG6 52.5
RSS1592 chr5 21689204 2e-43 LG6 54.5
RSS0706 chr5 21607532 7e-62 LG6 54.9
RSS2916 chr5 21511551 2e-28 LG6 55.1
RSS2661 chr5 21070882 1e-89 LG6 59.7
RSS3495 chr5 636555 1e-104 LG6 62.8
RSS2575 chr5 9498906 9e-55 LG6 122.5
RSS1301 chr5 9944510 7e-85 LG6 123.1
RSS1035 chr5 19106816 4e-26 LG6 138.9
RSS1133 chr5 18709884 8e-75 LG6 141.6
RSS0093 chr5 17825584 2e-29 LG6 142.3
RSS3041 chr5 17641203 1e-27 LG6 143.3
RSS0603 chr5 17623398 6e-90 LG6 143.7
RSS1425 chr5 25244545 2e-92 LG6 153.2
RSS3174 chr5 12078031 1e-49 LG7 36.7
RSS0015 chr5 12589833 3e-53 LG7 79.3
RSS3870 chr5 19107324 1e-24 LG7 84.4
RSS1899 chr5 19350242 1e-114 LG7 86.4
RSS0441 chr5 20706556 2e-78 LG8 22.4
RSS0596 chr5 18479075 2e-39 LG8 30.2
RSS3288 chr5 22874485 2e-75 LG8 55.9
RSS2129 chr5 23275474 2e-85 LG8 60.9
RSS0977 chr5 7435674 1e-125 LG8 64.4
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus