Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
Evalue GHRI
Name Position* Linkage Position
RSS3792 chr5 23152770 2e-73
RSS3795 chr5 7084555 5e-80
RSS3798 chr5 3359015 2e-55
RSS3814 chr5 10675807 8e-47
RSS3816 chr5 5228774 2e-80
RSS3823 chr5 5686493 2e-34
RSS3830 chr5 24103407 5e-50 LG6 37.4
RSS3837 chr5 14135506 1e-53
RSS3870 chr5 19107324 1e-24 LG7 84.4
RSS3871 chr5 13415968 1e-146
RSS3898 chr5 26177016 5e-46
RSS3915 chr5 15975327 1e-86
RSS3923 chr5 5997046 6e-32
RSS3929 chr5 17021839 1e-113
RSS3943 chr5 16542853 5e-93
RSS3953 chr5 20952563 3e-36
RSS3954 chr5 8117607 9e-21
RSS3955 chr5 1931672 1e-100
RSS3959 chr5 9266981 1e-117
RSS3961 chr5 5183207 1e-104
RSS3962 chr5 267569 6e-61
RSS3967 chr5 4681532 4e-51
RSS3973 chr5 543006 1e-45 LG1 109.3
RSS3981 chr5 21537089 7e-86
RSS3983 chr5 18823742 6e-62
RSS3991 chr5 1173604 8e-26 LG1 108.0
RSS4016 chr5 26469383 2e-61
RSS4019 chr5 24317718 3e-23
RSS4033 chr5 2859902 1e-109
RSS4037 chr5 3792785 1e-104
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus