Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS3553 chr5 17451835 1e-77
RSS3557 chr5 25749624 1e-42
RSS3560 chr5 3235776 1e-111
RSS3573 chr5 6090603 4e-69
RSS3580 chr5 2273692 1e-103
RSS3588 chr5 5432741 2e-92
RSS3592 chr5 15008786 2e-53
RSS3606 chr5 4150107 3e-57
RSS3616 chr5 17557648 7e-37 LG4 85.6
RSS3621 chr5 24611644 4e-62
RSS3630 chr5 5718886 4e-65
RSS3631 chr5 9054386 5e-26
RSS3632 chr5 22867435 5e-87
RSS3635 chr5 25893396 4e-57 LG3 114.1
RSS3636 chr5 2273692 3e-82
RSS3637 chr5 19788906 9e-70 LG4 87.9
RSS3638 chr5 12078031 2e-52 LG9 26.4
RSS3643 chr5 22403058 4e-65
RSS3652 chr5 2002870 2e-84
RSS3655 chr5 26041485 2e-97
RSS3664 chr5 4728158 7e-98
RSS3669 chr5 25762655 6e-43
RSS3680 chr5 24864959 7e-40
RSS3685 chr5 24441627 4e-85
RSS3691 chr5 2147556 1e-80
RSS3711 chr5 26905115 8e-54
RSS3714 chr5 16796984 7e-35
RSS3719 chr5 7305088 1e-106
RSS3720 chr5 3429319 2e-76
RSS3724 chr5 4196917 1e-124
RSS3726 chr5 4899379 8e-72
RSS3730 chr5 1503832 2e-42
RSS3732 chr5 4898859 3e-71
RSS3736 chr5 24432645 1e-122 LG5 59.1
RSS3739 chr5 16788930 4e-80 LG4 66.3
RSS3740 chr5 22264806 1e-35
RSS3743 chr5 2183977 6e-70
RSS3744 chr5 3125742 2e-34
RSS3745 chr5 23097121 6e-67
RSS3748 chr5 26832147 8e-73
RSS3750 chr5 594750 6e-57
RSS3752 chr5 22297473 3e-36
RSS3760 chr5 21485911 1e-108
RSS3763 chr5 3334436 5e-37
RSS3769 chr5 16799707 2e-71
RSS3772 chr5 16069507 2e-51 LG4 97.8
RSS3774 chr5 23587460 2e-59
RSS3783 chr5 2632007 1e-64
RSS3788 chr5 21139194 1e-116
RSS3791 chr5 26809650 8e-70
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus