Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS3193 chr5 23693938 4e-22
RSS3211 chr5 9481672 2e-51
RSS3213 chr5 25210681 7e-64
RSS3219 chr5 7304415 6e-90
RSS3221 chr5 26523881 1e-84
RSS3230 chr5 16627591 1e-44
RSS3232 chr5 4474030 3e-85
RSS3236 chr5 1195129 9e-58
RSS3237 chr5 23451794 1e-25
RSS3238 chr5 6718391 7e-73
RSS3252 chr5 17695689 3e-79
RSS3260 chr5 25763202 5e-52
RSS3269 chr5 23451794 8e-25
RSS3272 chr5 19858458 3e-67
RSS3274 chr5 25929943 4e-40
RSS3286 chr5 24707955 5e-72
RSS3288 chr5 22874485 2e-75 LG8 55.9
RSS3295 chr5 25334126 4e-76
RSS3304 chr5 22604543 2e-37
RSS3307 chr5 26417737 2e-31
RSS3334 chr5 2761305 9e-52
RSS3357 chr5 3556064 8e-75
RSS3365 chr5 16281576 1e-108
RSS3369 chr5 25976311 1e-92
RSS3373 chr5 25944580 8e-66
RSS3383 chr5 5992382 6e-39
RSS3385 chr5 17302524 2e-76
RSS3387 chr5 21428644 7e-30
RSS3388 chr5 26951530 2e-71
RSS3396 chr5 4308886 1e-101
RSS3407 chr5 25670356 4e-91
RSS3408 chr5 10678618 6e-95
RSS3410 chr5 1672419 1e-100
RSS3424 chr5 7166053 3e-36
RSS3428 chr5 1072137 2e-50
RSS3429 chr5 4308868 2e-97
RSS3442 chr5 16555415 6e-64
RSS3470 chr5 322513 2e-83
RSS3493 chr5 7249874 1e-50
RSS3495 chr5 636555 1e-104 LG6 62.8
RSS3500 chr5 1622059 2e-67 LG4 30.6
RSS3511 chr5 23056581 1e-44
RSS3516 chr5 17452765 9e-75 LG4 77.1
RSS3523 chr5 4068950 7e-40
RSS3524 chr5 1973822 1e-115
RSS3532 chr5 21972489 1e-27
RSS3534 chr5 19341483 1e-116 LG2 56.4
RSS3535 chr5 23057455 1e-84
RSS3540 chr5 16738965 2e-60 LG1 0.0
RSS3549 chr5 26798191 2e-88
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus