Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS2918 chr5 5092200 1e-127
RSS2921 chr5 2200767 4e-86
RSS2922 chr5 25216934 2e-57
RSS2928 chr5 7091596 1e-39
RSS2937 chr5 1521049 8e-42
RSS2939 chr5 26049171 1e-88
RSS2945 chr5 6015919 2e-87 LG1 104.7
RSS2951 chr5 3525246 3e-70
RSS2964 chr5 26150288 1e-111
RSS2972 chr5 2719724 2e-62
RSS2978 chr5 23525394 2e-97
RSS2987 chr5 6218657 1e-33
RSS2989 chr5 22682817 1e-141
RSS3002 chr5 6779890 6e-73 LG8 67.0
RSS3004 chr5 16489569 3e-82
RSS3011 chr5 25333951 6e-38
RSS3012 chr5 19311447 1e-37
RSS3014 chr5 8372397 1e-122
RSS3018 chr5 20457484 2e-55
RSS3023 chr5 21963099 5e-51
RSS3024 chr5 990117 5e-59
RSS3029 chr5 19145783 8e-37
RSS3041 chr5 17641203 1e-27 LG6 143.3
RSS3043 chr5 13584825 2e-76 LG3 73.7
RSS3054 chr5 842884 2e-30
RSS3059 chr5 20705398 5e-78
RSS3063 chr5 22194068 2e-79
RSS3066 chr5 1319969 1e-116
RSS3067 chr5 26496492 3e-85
RSS3073 chr5 26425046 1e-69
RSS3076 chr5 23107896 1e-96
RSS3097 chr5 24512809 4e-86
RSS3099 chr5 23107990 4e-46
RSS3103 chr5 25491168 1e-126
RSS3104 chr5 9820536 1e-68
RSS3107 chr5 22482689 2e-79
RSS3108 chr5 25293718 2e-82
RSS3121 chr5 16580712 4e-36
RSS3127 chr5 9788298 5e-91
RSS3138 chr5 20833352 8e-61 LG5 18.5
RSS3142 chr5 18984692 8e-77
RSS3149 chr5 16542853 1e-60
RSS3161 chr5 4649085 1e-75
RSS3170 chr5 5465929 7e-40
RSS3171 chr5 1640037 1e-44
RSS3172 chr5 6852409 7e-83 LG8 67.0
RSS3174 chr5 12078031 1e-49 LG7 36.7
RSS3175 chr5 25912446 7e-47
RSS3181 chr5 25137175 2e-35
RSS3182 chr5 25019810 1e-56
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus