Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS3288 chr5 22874485 2e-75 LG8 55.9
RSS0672 chr5 22936696 3e-69
RSS0572 chr5 23022511 1e-107
RSS1634 chr5 23031970 5e-56
RSS3511 chr5 23056581 1e-44
RSS3535 chr5 23057455 1e-84
RSS2292 chr5 23076321 4e-92
RSS2211 chr5 23077804 2e-90
RSS3745 chr5 23097121 6e-67
RSS3076 chr5 23107896 1e-96
RSS3099 chr5 23107990 4e-46
RSS3792 chr5 23152770 2e-73
RSS0879 chr5 23168414 9e-51
RSS0314 chr5 23179974 2e-71
RSS1790 chr5 23181215 2e-30 LG6 42.7
RSS2129 chr5 23275474 2e-85 LG8 60.9
RSS2609 chr5 23284200 4e-38
RSS1608 chr5 23299078 5e-27
RSS0819 chr5 23430863 6e-90
RSS3237 chr5 23451794 1e-25
RSS3269 chr5 23451794 8e-25
RSS2022 chr5 23452466 3e-35
RSS2447 chr5 23460282 2e-78
RSS1401 chr5 23501135 1e-107
RSS2978 chr5 23525394 2e-97
RSS2616 chr5 23555861 4e-66
RSS2672 chr5 23556653 3e-86
RSS3774 chr5 23587460 2e-59
RSS0832 chr5 23660956 1e-104 LG8 69.8
RSS3193 chr5 23693938 4e-22
RSS1870 chr5 23725021 2e-79 LG6 39.8
RSS2389 chr5 23796094 5e-48
RSS1337 chr5 23834400 9e-85 LG6 39.0
RSS2826 chr5 23841741 5e-50
RSS1532 chr5 23847789 4e-67 LG6 33.6
RSS2864 chr5 23905386 1e-114
RSS1881 chr5 24007587 4e-63
RSS1774 chr5 24022838 3e-24 LG3 110.8
RSS1614 chr5 24103385 6e-64 LG5 60.8
RSS3830 chr5 24103407 5e-50 LG6 37.4
RSS0225 chr5 24144550 1e-61 LG6 35.1
RSS0216 chr5 24300004 7e-65
RSS4019 chr5 24317718 3e-23
RSS2336 chr5 24317919 2e-59
RSS1395 chr5 24362967 2e-47 LG1 75.5
RSS0505 chr5 24367652 1e-106
RSS0783 chr5 24373699 6e-57
RSS2394 chr5 24373804 4e-47 LG5 59.6
RSS1076 chr5 24373804 6e-89 LG5 60.1
RSS1341 chr5 24386421 8e-43 LG5 59.7
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730


MarkerDB | Raphanus sativus