Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS1573 chr5 19328379 5e-46
RSS1641 chr5 19328379 5e-46
RSS3534 chr5 19341483 1e-116 LG2 56.4
RSS0464 chr5 19346094 8e-76
RSS1899 chr5 19350242 1e-114 LG7 86.4
RSS1460 chr5 19385670 6e-72
RSS1493 chr5 19388987 3e-27
RSS0016 chr5 19529622 8e-50
RSS1681 chr5 19550439 8e-80
RSS2162 chr5 19604925 3e-75
RSS0044 chr5 19609474 2e-71
RSS1069 chr5 19609972 2e-88
RSS1256 chr5 19644874 1e-24
RSS2456 chr5 19644973 2e-24
RSS2808 chr5 19653668 1e-79
RSS0648 chr5 19699241 2e-83
RSS0201 chr5 19731799 6e-51
RSS3637 chr5 19788906 9e-70 LG4 87.9
RSS2027 chr5 19789521 5e-41
RSS1994 chr5 19805044 3e-95
RSS0903 chr5 19816497 5e-62
RSS3272 chr5 19858458 3e-67
RSS1237 chr5 19858458 4e-81
RSS2451 chr5 19898860 2e-27
RSS2734 chr5 19898902 1e-51
RSS2366 chr5 19977090 6e-52
RSS2252 chr5 20031425 1e-65
RSS0384 chr5 20031532 3e-32
RSS0969 chr5 20168207 4e-81
RSS2542 chr5 20453101 1e-70
RSS3018 chr5 20457484 2e-55
RSS2343 chr5 20510279 8e-91
RSS2550 chr5 20687896 6e-52
RSS0602 chr5 20691241 3e-65
RSS3059 chr5 20705398 5e-78
RSS0441 chr5 20706556 2e-78 LG8 22.4
RSS3138 chr5 20833352 8e-61 LG5 18.5
RSS0345 chr5 20850879 2e-87
RSS2020 chr5 20882816 3e-94
RSS2889 chr5 20902362 3e-68 LG5 28.4
RSS3953 chr5 20952563 3e-36
RSS0659 chr5 21070315 1e-107
RSS2661 chr5 21070882 1e-89 LG6 59.7
RSS0541 chr5 21124776 3e-83
RSS2636 chr5 21132758 7e-49
RSS3788 chr5 21139194 1e-116
RSS2740 chr5 21153010 1e-53
RSS0058 chr5 21153675 6e-30
RSS2312 chr5 21195128 2e-41
RSS0921 chr5 21208945 3e-27
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730

MarkerDB | Raphanus sativus