Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS0006 chr5 22819277 9e-30
RSS0010 chr5 8435528 3e-28
RSS0011 chr5 19012817 2e-35 LG1 103.6
RSS0014 chr5 6852025 9e-67
RSS0015 chr5 12589833 3e-53 LG7 79.3
RSS0016 chr5 19529622 8e-50
RSS0020 chr5 25915840 1e-55 LG3 123.8
RSS0023 chr5 3267894 5e-25
RSS0031 chr5 9401323 7e-86 LG4 124.6
RSS0036 chr5 3065221 4e-73
RSS0044 chr5 19609474 2e-71
RSS0055 chr5 3823194 1e-62
RSS0058 chr5 21153675 6e-30
RSS0062 chr5 4637630 2e-69
RSS0067 chr5 7856233 5e-76 LG4 110.9
RSS0085 chr5 22641297 1e-46
RSS0090 chr5 26616541 8e-69
RSS0091 chr5 10136018 8e-93
RSS0093 chr5 17825584 2e-29 LG6 142.3
RSS0096 chr5 10796995 2e-38
RSS0105 chr5 1520398 2e-29
RSS0110 chr5 4303405 3e-94
RSS0111 chr5 25098618 1e-100
RSS0119 chr5 7380854 5e-98 LG5 58.4
RSS0120 chr5 8354827 1e-125
RSS0126 chr5 15883471 4e-63
RSS0149 chr5 22604543 3e-43
RSS0150 chr5 1537113 7e-35
RSS0164 chr5 1609344 1e-108
RSS0167 chr5 4453633 7e-70
RSS0172 chr5 7278601 2e-85
RSS0178 chr5 8330990 2e-77 LG4 110.0
RSS0182 chr5 16815816 6e-25
RSS0188 chr5 14595500 2e-60
RSS0201 chr5 19731799 6e-51
RSS0204 chr5 19107327 3e-35
RSS0207 chr5 17988450 5e-66
RSS0216 chr5 24300004 7e-65
RSS0224 chr5 2175937 1e-107
RSS0225 chr5 24144550 1e-61 LG6 35.1
RSS0236 chr5 24624234 3e-71
RSS0239 chr5 1092653 1e-34 LG1 110.0
RSS0241 chr5 22348947 6e-49
RSS0244 chr5 1216610 4e-89
RSS0245 chr5 7006673 1e-107
RSS0254 chr5 7954948 2e-76 LG2 42.2
RSS0255 chr5 25216934 5e-29 LG3 126.4
RSS0262 chr5 13868087 4e-42
RSS0278 chr5 4980730 1e-80
RSS0287 chr5 4709550 9e-27
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730


MarkerDB | Raphanus sativus