Radish Marker Database

Arabidopsis genome (TAIR10) list : chr5

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 730


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS1786 chr5 55278 5e-22 LG1 109.2
RSS0935 chr5 264899 5e-75
RSS3962 chr5 267569 6e-61
RSS0576 chr5 310460 2e-39
RSS1956 chr5 310682 1e-126
RSS3470 chr5 322513 2e-83
RSS2856 chr5 359373 1e-44
RSS2674 chr5 411315 8e-78
RSS1488 chr5 426884 1e-42
RSS3973 chr5 543006 1e-45 LG1 109.3
RSS3750 chr5 594750 6e-57
RSS1147 chr5 628527 2e-35 LG1 109.3
RSS3495 chr5 636555 1e-104 LG6 62.8
RSS2718 chr5 642787 2e-95
RSS1822 chr5 652527 9e-59
RSS1352 chr5 693888 4e-80
RSS1834 chr5 693888 8e-81
RSS1840 chr5 693888 4e-80
RSS1574 chr5 711636 3e-45 LG1 109.3
RSS0744 chr5 711826 1e-52
RSS2306 chr5 769672 2e-68
RSS2914_a chr5 807713 5e-61 LG1 109.7
RSS1992 chr5 832395 1e-84
RSS2246 chr5 832869 4e-57
RSS1224 chr5 833665 2e-26
RSS3054 chr5 842884 2e-30
RSS1389 chr5 865090 5e-21
RSS3024 chr5 990117 5e-59
RSS3428 chr5 1072137 2e-50
RSS2413 chr5 1092092 2e-65
RSS0239 chr5 1092653 1e-34 LG1 110.0
RSS1260 chr5 1146801 6e-64
RSS3991 chr5 1173604 8e-26 LG1 108.0
RSS3236 chr5 1195129 9e-58
RSS2911 chr5 1216445 2e-52
RSS0244 chr5 1216610 4e-89
RSS2182 chr5 1267210 2e-55
RSS0613 chr5 1288533 5e-86
RSS2393 chr5 1319948 1e-112
RSS3066 chr5 1319969 1e-116
RSS1365 chr5 1389208 1e-71
RSS2352 chr5 1427406 6e-67
RSS2847 chr5 1456613 2e-39
RSS1814 chr5 1499440 7e-78
RSS1702 chr5 1503606 2e-78
RSS3730 chr5 1503832 2e-42
RSS1192 chr5 1503832 1e-80
RSS2198 chr5 1506546 5e-77
RSS2400 chr5 1512245 2e-97
RSS0105 chr5 1520398 2e-29
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 730


MarkerDB | Raphanus sativus