Radish Marker Database

Arabidopsis genome (TAIR10) list : chr3

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 721


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS2080 chr3 7917687 1e-65 LG3 43.5
RSS2084 chr3 9150597 4e-22
RSS2089 chr3 20061923 4e-36 LG3 78.6
RSS2093 chr3 20595428 3e-39
RSS2111 chr3 19136639 5e-55
RSS2121 chr3 17964212 3e-61
RSS2122 chr3 19767893 2e-41
RSS2124 chr3 4363789 4e-31
RSS2126 chr3 21047867 4e-37 LG4 4.0
RSS2128 chr3 20297496 5e-95
RSS2130 chr3 21124460 8e-39
RSS2133 chr3 6803643 5e-60
RSS2136 chr3 22501712 2e-66
RSS2138 chr3 3958977 6e-48 LG2 10.7
RSS2149 chr3 6349284 5e-34
RSS2153 chr3 9492343 4e-77
RSS2175 chr3 15703879 4e-40
RSS2184 chr3 17793437 2e-39
RSS2188 chr3 22143237 2e-42 LG3 91.4
RSS2191 chr3 4356994 1e-121
RSS2200 chr3 244922 1e-28
RSS2205 chr3 17220558 7e-48
RSS2222 chr3 7592253 1e-112
RSS2231 chr3 2389110 2e-39
RSS2238 chr3 3834887 3e-86
RSS2240 chr3 6601662 2e-21
RSS2241 chr3 3728074 4e-50
RSS2244 chr3 404989 1e-60
RSS2256 chr3 1231645 3e-77
RSS2269 chr3 21727048 2e-88
RSS2276 chr3 4914210 4e-54
RSS2281 chr3 8139501 3e-77
RSS2296 chr3 1340095 4e-75 LG3 4.3
RSS2298 chr3 228125 3e-86
RSS2309 chr3 23358205 1e-117
RSS2311 chr3 19329387 2e-36
RSS2315 chr3 482495 1e-123
RSS2316 chr3 17126515 9e-67 LG5 38.6
RSS2317 chr3 22143927 2e-78
RSS2323 chr3 3266756 2e-70
RSS2324 chr3 152136 5e-76
RSS2327 chr3 9482026 7e-74
RSS2335 chr3 5202675 2e-71 LG2 86.6
RSS2340 chr3 23017566 3e-89
RSS2345 chr3 10077521 1e-114
RSS2346 chr3 6182405 2e-26
RSS2347 chr3 10924990 2e-55
RSS2350 chr3 4273947 1e-49
RSS2354 chr3 4769874 1e-52
RSS2368 chr3 7587981 1e-108 LG5 106.7
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 721


MarkerDB | Raphanus sativus