Radish Marker Database

Arabidopsis genome (TAIR10) list : chr3

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 721


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS1533 chr3 3510102 1e-100
RSS1536 chr3 22454190 1e-79
RSS1537 chr3 23374111 3e-42 LG4 1.3
RSS1539 chr3 6409331 2e-62
RSS1561 chr3 5693231 4e-58
RSS1567 chr3 8529396 6e-24
RSS1591 chr3 6350184 1e-104
RSS1593 chr3 6943189 2e-83
RSS1594 chr3 4430318 7e-48
RSS1596 chr3 23164866 7e-61
RSS1597 chr3 3135456 7e-43
RSS1598 chr3 6108128 1e-50
RSS1600 chr3 8871265 5e-35
RSS1603 chr3 21431575 2e-79
RSS1610 chr3 6804012 6e-31 LG3 37.3
RSS1612 chr3 21725569 9e-77
RSS1617 chr3 20388355 7e-62
RSS1631 chr3 5891150 1e-137
RSS1635 chr3 14733059 8e-28 LG5 38.2
RSS1642 chr3 4547156 1e-34
RSS1646 chr3 8481270 6e-45
RSS1652 chr3 19506014 3e-50
RSS1657 chr3 7474952 1e-54 LG3 41.3
RSS1659 chr3 17568670 1e-58
RSS1661 chr3 2145716 1e-103 LG3 147.1
RSS1666 chr3 21060323 2e-54
RSS1674 chr3 3624050 2e-83 LG3 145.8
RSS1686 chr3 23373299 2e-91
RSS1690 chr3 5802949 5e-70
RSS1693 chr3 19342260 5e-74
RSS1694 chr3 18573781 1e-71
RSS1695 chr3 5447870 2e-49
RSS1697 chr3 4955172 7e-97 LG3 26.9
RSS1698 chr3 18196425 2e-54
RSS1700 chr3 937420 4e-61
RSS1704 chr3 21114057 1e-78
RSS1706 chr3 9934137 1e-97
RSS1718 chr3 15869444 5e-72
RSS1719 chr3 5021230 1e-97 LG3 29.0
RSS1734 chr3 2664655 1e-43
RSS1735 chr3 9254718 1e-71
RSS1739 chr3 2168175 7e-63
RSS1746 chr3 16784 5e-79
RSS1761 chr3 20761176 3e-92
RSS1763 chr3 21069756 4e-43 LG3 88.7
RSS1763_a chr3 21069756 4e-43 LG3 105.4
RSS1768 chr3 2612796 6e-81
RSS1788 chr3 9357377 2e-80
RSS1789 chr3 23186359 1e-105
RSS1791 chr3 2168041 2e-53
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 721

MarkerDB | Raphanus sativus