Radish Marker Database

Arabidopsis genome (TAIR10) list : chr3

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 721


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS1274 chr3 6905880 4e-69
RSS1276 chr3 17339894 2e-41 LG2 92.6
RSS1281 chr3 5492770 1e-131
RSS1285 chr3 18974213 5e-71
RSS1287 chr3 5069591 1e-100
RSS1294 chr3 1313461 6e-83
RSS1311 chr3 21828736 2e-80
RSS1313 chr3 23164206 3e-86
RSS1316 chr3 16913919 1e-76
RSS1318 chr3 3719652 1e-66
RSS1319 chr3 9190430 2e-70 LG3 132.9
RSS1327 chr3 9269770 5e-42
RSS1331 chr3 21628043 7e-63
RSS1335 chr3 23459797 2e-84
RSS1338 chr3 10017765 1e-55 LG2 51.1
RSS1339 chr3 1830154 4e-98
RSS1342 chr3 6605951 8e-64
RSS1347 chr3 10324905 3e-48
RSS1354 chr3 21431449 2e-48
RSS1360 chr3 2514934 2e-40
RSS1361 chr3 2133154 4e-65 LG3 8.5
RSS1367 chr3 7978247 1e-77 LG2 20.3
RSS1371 chr3 23165094 2e-73 LG1 32.7
RSS1375 chr3 19955884 8e-37
RSS1383 chr3 5992633 1e-56
RSS1393 chr3 4591303 1e-26
RSS1394 chr3 10960027 8e-66
RSS1399 chr3 9931735 1e-110
RSS1418 chr3 9971921 3e-37 LG4 95.7
RSS1422 chr3 22611972 3e-29
RSS1429 chr3 4911592 2e-82
RSS1430 chr3 7376946 2e-47
RSS1437 chr3 7111282 2e-43 LG3 40.4
RSS1440 chr3 18388979 2e-37
RSS1454 chr3 1824784 3e-77
RSS1455 chr3 3959403 3e-27
RSS1457 chr3 5980433 2e-90 LG3 143.3
RSS1459 chr3 1614638 5e-69
RSS1476 chr3 19877601 6e-69
RSS1479 chr3 1908899 7e-72
RSS1482 chr3 996015 6e-73
RSS1489 chr3 2641924 1e-76 LG3 13.3
RSS1497 chr3 183543 1e-25
RSS1503 chr3 23295958 8e-82
RSS1504 chr3 18091609 2e-63
RSS1508 chr3 21544696 7e-75
RSS1511 chr3 8683145 6e-92
RSS1519 chr3 17504794 1e-100
RSS1521 chr3 2327016 2e-73
RSS1527 chr3 7627454 8e-85
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 721


MarkerDB | Raphanus sativus