Radish Marker Database

Arabidopsis genome (TAIR10) list : chr3

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 721

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
Evalue GHRI
Name Position* Linkage Position
RSS0313 chr3 23092260 1e-42 LG1 32.0
RSS1313 chr3 23164206 3e-86
RSS1596 chr3 23164866 7e-61
RSS0797 chr3 23165094 1e-73 LG1 32.0
RSS1371 chr3 23165094 2e-73 LG1 32.7
RSS3080 chr3 23173554 1e-106
RSS1789 chr3 23186359 1e-105
RSS2690 chr3 23273862 5e-72
RSS1503 chr3 23295958 8e-82
RSS2408 chr3 23315725 9e-75
RSS0248 chr3 23323707 8e-43
RSS1169 chr3 23328214 3e-90
RSS2309 chr3 23358205 1e-117
RSS1832 chr3 23372575 6e-63
RSS1686 chr3 23373299 2e-91
RSS1537 chr3 23374111 3e-42 LG4 1.3
RSS0409 chr3 23376711 1e-106
RSS1129 chr3 23416888 3e-99
RSS2767 chr3 23450771 1e-77
RSS0886 chr3 23450771 5e-84
RSS1335 chr3 23459797 2e-84
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 721

MarkerDB | Raphanus sativus