Radish Marker Database

Arabidopsis genome (TAIR10) list : chr3

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 721


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS3370 chr3 20697780 1e-117
RSS3421 chr3 20704873 2e-78
RSS1761 chr3 20761176 3e-92
RSS0887 chr3 20762892 2e-49
RSS2056 chr3 20828126 1e-47
RSS0068 chr3 20828126 2e-49 LG3 82.3
RSS0866 chr3 20840907 3e-53 LG3 83.7
RSS2462 chr3 20860099 2e-52
RSS2597 chr3 20892860 2e-70
RSS2496 chr3 20920276 9e-75
RSS0688 chr3 20934404 1e-123
RSS0851 chr3 20958896 5e-72
RSS2872 chr3 20962563 3e-52
RSS2790 chr3 20963052 8e-46
RSS2126 chr3 21047867 4e-37 LG4 4.0
RSS0193 chr3 21047903 4e-36 LG3 86.6
RSS2633 chr3 21060188 1e-83
RSS1666 chr3 21060323 2e-54
RSS1802 chr3 21060356 1e-37
RSS1763 chr3 21069756 4e-43 LG3 88.7
RSS1763_a chr3 21069756 4e-43 LG3 105.4
RSS0859 chr3 21076690 5e-97
RSS3612 chr3 21096222 1e-68
RSS2370 chr3 21112127 1e-92
RSS1704 chr3 21114057 1e-78
RSS2130 chr3 21124460 8e-39
RSS3035 chr3 21139640 4e-66
RSS3325 chr3 21154646 5e-96
RSS0348 chr3 21238820 2e-68
RSS0142 chr3 21239571 2e-71
RSS0162 chr3 21302531 1e-47
RSS2995 chr3 21308582 9e-42
RSS3893 chr3 21335864 2e-97 LG1 22.6
RSS3781 chr3 21405119 8e-56
RSS3416 chr3 21408153 8e-48
RSS1099 chr3 21411236 7e-36
RSS1354 chr3 21431449 2e-48
RSS1603 chr3 21431575 2e-79
RSS3246 chr3 21432538 1e-141 LG4 4.6
RSS3979 chr3 21441043 1e-50
RSS0301 chr3 21471347 1e-103
RSS0154 chr3 21485794 4e-46 LG3 87.6
RSS1025 chr3 21489705 9e-54
RSS0583 chr3 21489903 2e-93
RSS0941 chr3 21522777 2e-86
RSS1794 chr3 21522985 9e-49
RSS3874 chr3 21522994 7e-53
RSS0524 chr3 21531809 1e-107
RSS1508 chr3 21544696 7e-75
RSS1331 chr3 21628043 7e-63
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 721


MarkerDB | Raphanus sativus