Radish Marker Database

Arabidopsis genome (TAIR10) list : chr3

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 721


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS2957 chr3 2997496 3e-29
RSS2960 chr3 19494818 3e-45 LG2 80.8
RSS2965 chr3 17505478 2e-87
RSS2973 chr3 2860223 2e-38
RSS2974 chr3 21790832 2e-83 LG3 90.5
RSS2975 chr3 7223536 1e-81
RSS2985 chr3 6960028 1e-96
RSS2986 chr3 4737789 2e-55
RSS2991 chr3 6943312 8e-86
RSS2995 chr3 21308582 9e-42
RSS2996 chr3 20498016 3e-55
RSS3013 chr3 20224471 1e-69
RSS3016 chr3 19071460 2e-85
RSS3021 chr3 3425774 1e-141
RSS3035 chr3 21139640 4e-66
RSS3037 chr3 5625341 1e-121
RSS3042 chr3 3439077 3e-62
RSS3052 chr3 3839289 1e-108
RSS3056 chr3 18378039 7e-69
RSS3061 chr3 284098 1e-92 LG3 147.6
RSS3062 chr3 6049062 3e-42
RSS3069 chr3 8139615 1e-107
RSS3079 chr3 17309325 2e-74
RSS3080 chr3 23173554 1e-106
RSS3089 chr3 17699690 1e-124 LG3 74.3
RSS3098 chr3 5309040 4e-52
RSS3106 chr3 5511919 1e-174
RSS3116 chr3 10442948 7e-68
RSS3119 chr3 7275826 4e-85
RSS3125 chr3 7445231 2e-98 LG2 20.5
RSS3126 chr3 6682903 1e-44
RSS3128 chr3 1480627 2e-57
RSS3139 chr3 7077216 5e-56
RSS3146 chr3 9934149 9e-83
RSS3151 chr3 4738461 1e-55
RSS3152 chr3 4472885 3e-98
RSS3167 chr3 10506200 2e-86
RSS3190 chr3 1490905 9e-55
RSS3196 chr3 3091575 2e-65
RSS3212 chr3 2990568 1e-52
RSS3217 chr3 10090307 6e-77
RSS3220 chr3 11590432 4e-66
RSS3222 chr3 5063286 4e-41
RSS3243 chr3 536738 8e-50
RSS3244 chr3 1425011 1e-100 LG3 147.1
RSS3245 chr3 1656900 8e-45 LG3 147.1
RSS3246 chr3 21432538 1e-141 LG4 4.6
RSS3249 chr3 22896245 2e-92
RSS3250 chr3 23038914 1e-73 LG3 98.1
RSS3257 chr3 17790551 4e-31
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 721

MarkerDB | Raphanus sativus