Radish Marker Database

Arabidopsis genome (TAIR10) list : chr3

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 721


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)
Evalue GHRI
Name Position* Linkage Position
RSS1042 chr3 19688309 2e-57 LG1 16.0
RSS0953 chr3 19955884 3e-32 LG1 21.2
RSS0830 chr3 20176857 2e-83 LG1 21.2
RSS3893 chr3 21335864 2e-97 LG1 22.6
RSS0148 chr3 22841869 2e-57 LG1 29.9
RSS0313 chr3 23092260 1e-42 LG1 32.0
RSS0797 chr3 23165094 1e-73 LG1 32.0
RSS1371 chr3 23165094 2e-73 LG1 32.7
RSS3965_a chr3 1232107 2e-55 LG2 5.8
RSS2859 chr3 2859010 6e-81 LG2 7.3
RSS2760 chr3 2972494 7e-59 LG2 7.3
RSS0864 chr3 9136812 3e-25 LG2 7.3
RSS2138 chr3 3958977 6e-48 LG2 10.7
RSS2505 chr3 4010912 3e-81 LG2 11.3
RSS2497 chr3 6301365 4e-39 LG2 18.8
RSS0895 chr3 7081797 1e-100 LG2 19.3
RSS2680 chr3 7445231 1e-102 LG2 20.2
RSS3306 chr3 7411304 1e-53 LG2 20.3
RSS1367 chr3 7978247 1e-77 LG2 20.3
RSS3125 chr3 7445231 2e-98 LG2 20.5
RSS0768 chr3 7918323 1e-101 LG2 22.1
RSS3301 chr3 7918515 1e-98 LG2 25.9
RSS0895_a chr3 7081797 1e-100 LG2 37.6
RSS2865 chr3 10126570 2e-60 LG2 47.5
RSS0839_a chr3 9990368 5e-66 LG2 49.3
RSS1338 chr3 10017765 1e-55 LG2 51.1
RSS3754 chr3 282872 3e-72 LG2 58.3
RSS2960 chr3 19494818 3e-45 LG2 80.8
RSS0494 chr3 19404129 2e-41 LG2 82.5
RSS0654 chr3 19070051 9e-42 LG2 84.7
RSS2335 chr3 5202675 2e-71 LG2 86.6
RSS0318 chr3 17751101 5e-44 LG2 90.3
RSS1066 chr3 17689402 3e-69 LG2 90.8
RSS0144 chr3 17505478 6e-65 LG2 91.1
RSS1276 chr3 17339894 2e-41 LG2 92.6
RSS1104 chr3 16023992 9e-61 LG2 94.8
RSS1095 chr3 15510489 3e-41 LG2 95.2
RSS0166 chr3 22645776 4e-60 LG2 148.6
RSS0292_a chr3 41760 7e-71 LG3 0.0
RSS0361 chr3 1422443 2e-41 LG3 4.0
RSS2296 chr3 1340095 4e-75 LG3 4.3
RSS1361 chr3 2133154 4e-65 LG3 8.5
RSS3694 chr3 1939126 6e-96 LG3 9.5
RSS1242 chr3 2621138 2e-82 LG3 13.3
RSS1489 chr3 2641924 1e-76 LG3 13.3
RSS1903 chr3 2889925 2e-34 LG3 14.1
RSS0084 chr3 3373556 3e-54 LG3 15.0
RSS2040 chr3 3584336 6e-76 LG3 17.8
RSS3828 chr3 4012980 2e-44 LG3 21.0
RSS1153 chr3 4129083 7e-72 LG3 21.2
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 721


MarkerDB | Raphanus sativus