Radish Marker Database

Arabidopsis genome (TAIR10) list : chr1

Order of Daikon markers and Arabidopsis gene models

Daikon markers on the Arabidopsis genome (TAIR10)

Total Entries: 788


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(TAIR10)		 Evalue GHRI
Name Position* Linkage Position
RSS0005 chr1 29654837 2e-67
RSS0019 chr1 26936790 1e-100
RSS0025 chr1 12360868 4e-47
RSS0027 chr1 2684385 4e-21 LG7 15.1
RSS0028 chr1 27765312 1e-47
RSS0032 chr1 11538912 2e-95
RSS0037 chr1 6972271 1e-44
RSS0040 chr1 21950852 2e-72
RSS0042 chr1 19154734 1e-78 LG7 84.1
RSS0043 chr1 28882711 8e-26 LG1 63.6
RSS0045 chr1 23636970 3e-59
RSS0047 chr1 29760008 9e-36
RSS0070 chr1 346286 4e-62
RSS0071 chr1 5064640 5e-59
RSS0087 chr1 24098494 5e-45
RSS0097 chr1 2248860 5e-88
RSS0099 chr1 6400803 2e-72
RSS0112 chr1 3502515 2e-57
RSS0114 chr1 26675242 2e-77
RSS0117 chr1 23319736 2e-57
RSS0124 chr1 21517203 3e-45 LG2 30.8
RSS0127 chr1 26618514 7e-74
RSS0129 chr1 30142288 2e-68 LG6 11.0
RSS0131 chr1 26613560 2e-75
RSS0132 chr1 6684957 2e-64
RSS0133 chr1 24246230 1e-77
RSS0147 chr1 6971593 4e-25
RSS0152 chr1 11194720 4e-84
RSS0159 chr1 8351580 3e-47
RSS0161 chr1 20064038 1e-93
RSS0170 chr1 8506606 2e-53
RSS0171 chr1 13669782 1e-102 LG2 135.4
RSS0175 chr1 7654892 3e-96
RSS0177 chr1 5417597 1e-113
RSS0184 chr1 9913433 6e-91
RSS0187 chr1 19992393 5e-78
RSS0190 chr1 24261097 8e-82
RSS0192 chr1 4017588 2e-72 LG3 110.4
RSS0194 chr1 28803935 3e-63
RSS0198 chr1 901483 2e-63 LG8 10.0
RSS0206 chr1 8865910 1e-119
RSS0212 chr1 22643868 2e-84
RSS0217 chr1 8664634 3e-66
RSS0219 chr1 4877999 3e-67
RSS0229 chr1 7377566 7e-92 LG7 25.5
RSS0232 chr1 11532722 1e-97
RSS0246 chr1 18416806 1e-30
RSS0256 chr1 20407129 2e-59
RSS0260 chr1 9496721 1e-46
RSS0267 chr1 28715784 6e-54
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 788

MarkerDB | Raphanus sativus